Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_021349.1 Length=154872 Score E Sequences producing significant alignments: (Bits) Value seq1390 87.8 2e-12 >seq1390 Length=268060 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/169 (72%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 113125 CCAAGCCCAAGCCCTGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCA 113184 ||||| ||| ||||| | ||||||||||| || || | || |||||||||||| Sbjct 43915 CCAAGAACAACGGCTGCCCGGTGGGCCCGGGCCGGGGATCGGGCGCGGGCTCGCTGGTCG 43856 Query 113185 CCTACGTCATGGGCATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCT 113244 | ||||| || |||||| | |||||| | ||||| ||||| |||||||||| | Sbjct 43855 CGTACGTGCTGCTGATCACCGACCTGGACCCGCTGCAGTACAACCTGCTGTTCGAGCGTT 43796 Query 113245 TCATCAACCCGGACC--GCCCCGACTTCCCCGACATCGACGTCGACTTC 113291 || | |||||||| | | ||| | || ||| ||||| |||||||| Sbjct 43795 TCCTGAACCCGGAGCGGGTGTCGA--TGCCTGACTTCGACATCGACTTC 43749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495448991548800