Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1445 111 2e-19 >seq1445 Length=178852 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 || ||| ||||||||||| || || ||||||||||| | | |||| | || ||||| Sbjct 44444 ATCAAGATTGCTCAATTAGCCGGTTACGTTGCAGAACACTCTGCTTATCATCACGGTGAG 44503 Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069 |||| || ||| || || ||| || || ||| | |||||||| | ||||| || Sbjct 44504 CAAAGCTTGTGTTCCACCATTATTGGCTTGGCTCAAAACTTTGTTGGAAGCAATAACATT 44563 Query 166070 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCT 166129 ||||||||||| | |||||||||||||| | || |||| ||||||||| ||||| Sbjct 44564 AACTTACTTGAACCGAACGGTCAATTTGGTACTCGTTTGCAAGGTGGTAAAGATGCTGCT 44623 Query 166130 GCATCAAGATATATTT 166145 || | | || |||| Sbjct 44624 TCACCTCGTTACATTT 44639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632472483250200