Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq154 129 4e-25 >seq154 Length=42511 Score = 129 bits (142), Expect = 4e-25 Identities = 153/203 (75%), Gaps = 7/203 (3%) Strand=Plus/Minus Query 95656 GAACGAGAGCCTAGACGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGG 95715 ||| ||||| | | ||| | ||||| ||||| ||||| |||| || ||||| || || Sbjct 16985 GAAGGAGAGTCGCGTCGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGG 16926 Query 95716 CCGCTGCGTCGCCAGGACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGAC 95775 |||||||| ||||||| || || ||||| || || || ||||||||||| | ||| | Sbjct 16925 ACGCTGCGTGGCCAGGATCAGGTGGATGCCCGCGGCACGGGCCTTCTGGGCCAGGCGCGC 16866 Query 95776 AAT--GTTGGCCTCGACTTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCG 95833 || ||| |||||| || |||||| || ||||||||||||| |||| ||||||| Sbjct 16865 GATCAGTT--CCTCGA--TC-TTCTTGCCCACGACCATCATGAGGTCGGCCAACTCGTCG 16811 Query 95834 ACCACTACCACGATGTAGGGGAG 95856 | ||| || ||||||| ||| || Sbjct 16810 ATCACCACGACGATGTGGGGCAG 16788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351737918820365