Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq1612 172 2e-38 >seq1612 Length=217819 Score = 172 bits (190), Expect = 2e-38 Identities = 256/363 (71%), Gaps = 0/363 (0%) Strand=Plus/Plus Query 37150 CACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGAC 37209 ||||||||| ||||| | || |||||||| || || || | || ||||| | Sbjct 127802 CACTTCGGCCAGGACGTGTTCGTGACCCGCAAGGGCGCGGTGAGCGCGAAGCAGGGCCAG 127861 Query 37210 CTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGAAAT 37269 |||| ||||| || ||| ||||| ||| | |||||| ||||||||||| || Sbjct 127862 ATGGGGATCATTCCCGGCAGCATGGGCGCGCGCAGCTACATCGTGCGCGGCAAGGGCAAC 127921 Query 37270 TCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCA 37329 | || ||| | ||| ||||| ||||| || | ||||||||| ||||||| Sbjct 127922 GCGGAGAGCTTCGACAGCTGCTCGCACGGGGCCGGCCGCACGATGAGCCGTACCGAAGCC 127981 Query 37330 AAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAA 37389 || || || ||||| | |||| || ||||| ||| |||| | ||||||||||| Sbjct 127982 AAGCGTCGTTTCACGCTGAAGGACCAGCGCGCGGCGACCGAAGGGGTGGAGTGCCGCAAG 128041 Query 37390 GATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCC 37449 || | || || |||||||||| || ||| |||||||||||||| ||||| ||||| Sbjct 128042 GACGAGGACGTCATCGACGAGATCCCGATGGCCTACAAGGACATCGACGCGGTGATGGCG 128101 Query 37450 GCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGGT 37509 || || | ||||||||| ||||||||||||| || || || ||||||||||| Sbjct 128102 GCTCAGCAAGACCTGGTGGAGGTCGTGCACACGCTCAAGCAGGTGGTGTGCGTGAAGGGA 128161 Query 37510 TGA 37512 ||| Sbjct 128162 TGA 128164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139279619115980