Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq236 84.2 9e-11 >seq236 Length=160019 Score = 84.2 bits (92), Expect = 9e-11 Identities = 107/144 (74%), Gaps = 5/144 (3%) Strand=Plus/Plus Query 309703 GTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTGATT 309762 ||||||||||| ||||| ||| | ||||| | || |||||| || | || || || Sbjct 50656 GTCATACGAGACGGAATCGCATGCGGGTTCACGACAATGTCCGGGGTAATGCCTTCGACA 50715 Query 309763 GGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGCGTG 309821 | | || ||||| ||||||| | ||||| ||| ||||| || |||||||| | || Sbjct 50716 G---TAAACGGCATGTCTTCTTGACGGTACG-TCATGCCAATCGTCCCCTTTTGCCCATG 50771 Query 309822 CCTGGAAGCAAACTTGTCACCAAT 309845 || |||||||||||||| ||||| Sbjct 50772 CCGCGAAGCAAACTTGTCCCCAAT 50795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951920254060120