Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq1612 82.4 3e-11 >seq1612 Length=217819 Score = 82.4 bits (90), Expect = 3e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 56511 TCGAGACGATCAACACGCATCACAACTACACGCAGAAGGAGCTGCACGGCGGCCGTGAGG 56570 ||||| || | ||| || ||||||||| |||||||||| ||| ||||| || | Sbjct 127758 TCGAGGCGGTGAACTGCCACCACAACTACGTGCAGAAGGAGACCCACTTCGGCCAGGACG 127817 Query 56571 TGTGGTTGACCCGCAAGGGTGCGATCGACGCGCACGAGGGTGTGCGGGGCCTGATTCCCG 56630 ||| ||||||||||||| ||| | |||| | |||| | ||| | ||||||| Sbjct 127818 TGTTCGTGACCCGCAAGGGCGCGGTGAGCGCGAAGCAGGGCCAGATGGGGATCATTCCCG 127877 Query 56631 GCAGCATGGGCACTTGCTCGTATGTCGTGACGGGCAAGGGCAA 56673 ||||||||||| | || || ||||| ||||||||||| Sbjct 127878 GCAGCATGGGCGCGCGCAGCTACATCGTGCGCGGCAAGGGCAA 127920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199761128976255