Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq1435 96.9 4e-15 >seq1435 Length=478137 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 72104 TGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACCA 72163 ||||||||| ||||||| |||||| | ||||| || |||||||| || |||||||||||| Sbjct 92428 TGGTGCCGGATAACGGAATCGAACTGTTGACCTTCGCATTACAAGTGCGCTGCTCTACCA 92487 Query 72164 ACTGAGCTAAACCGGC 72179 |||||||||| ||||| Sbjct 92488 ACTGAGCTAATCCGGC 92503 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 72104 TGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACCA 72163 ||||||||| ||||||| |||||| | ||||| || |||||||| || |||||||||||| Sbjct 95694 TGGTGCCGGATAACGGAATCGAACTGTTGACCTTCGCATTACAAGTGCGCTGCTCTACCA 95753 Query 72164 ACTGAGCTAAACCGGC 72179 |||||||||| ||||| Sbjct 95754 ACTGAGCTAATCCGGC 95769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554340197762400