Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1445 102 1e-16 >seq1445 Length=178852 Score = 102 bits (112), Expect = 1e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 162998 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAA 163057 || ||| ||||||||||| || || ||||| ||||| | | ||| | |||||||| Sbjct 44444 ATCAAGATTGCTCAATTAGCCGGTTACGTTGCAGAACACTCTGCTTATCATCACGGTGAG 44503 Query 163058 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 163117 |||| || ||| || || ||| || || ||| | |||||||| | ||||| || Sbjct 44504 CAAAGCTTGTGTTCCACCATTATTGGCTTGGCTCAAAACTTTGTTGGAAGCAATAACATT 44563 Query 163118 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGC 163176 ||||||||||| | |||||||||||||| | || |||| ||||||||| |||| Sbjct 44564 AACTTACTTGAACCGAACGGTCAATTTGGTACTCGTTTGCAAGGTGGTAAAGATGCTGC 44622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635160410506200