Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq1445 93.3 6e-14 >seq1445 Length=178852 Score = 93.3 bits (102), Expect = 6e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 172886 ATTAAGGTTGCTCAGTTGAGTGGTTACATTGCAGAACAAACTGATTATAAACATGGTGAA 172945 || ||| ||||||| || |||||| |||||||||| ||| |||| | || ||||| Sbjct 44444 ATCAAGATTGCTCAATTAGCCGGTTACGTTGCAGAACACTCTGCTTATCATCACGGTGAG 44503 Query 172946 CAAAACCTTTGTGAAACTATAATAAAATTTGCACAGGATTTTGTAGGTACAAATAACATA 173005 |||| | | ||| || || || || || || | ||||| || | |||||||| Sbjct 44504 CAAAGCTTGTGTTCCACCATTATTGGCTTGGCTCAAAACTTTGTTGGAAGCAATAACATT 44563 Query 173006 ACATTACTTGAACCAGATGGTCAGTTTGGTACTAGACTTGAAGGAGGTAAAGAT 173059 | ||||||||||| | ||||| ||||||||| | | |||| ||||||||| Sbjct 44564 AACTTACTTGAACCGAACGGTCAATTTGGTACTCGTTTGCAAGGTGGTAAAGAT 44617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655262266485000