Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1445 104 3e-17 >seq1445 Length=178852 Score = 104 bits (114), Expect = 3e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 165167 TTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAACAAAATT 165226 ||||||||||| || || ||||||||||| | | |||| | || ||||| |||| | Sbjct 44451 TTGCTCAATTAGCCGGTTACGTTGCAGAACACTCTGCTTATCATCACGGTGAGCAAAGCT 44510 Query 165227 TATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGCATTAC 165286 | ||| || || ||| || || ||| | |||||||| | ||||| || |||| Sbjct 44511 TGTGTTCCACCATTATTGGCTTGGCTCAAAACTTTGTTGGAAGCAATAACATTAACTTAC 44570 Query 165287 TTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGC 165338 ||||||| | |||||||||||||| | || |||| ||||||||| |||| Sbjct 44571 TTGAACCGAACGGTCAATTTGGTACTCGTTTGCAAGGTGGTAAAGATGCTGC 44622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628514190374400