Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_024367.1 Length=75028 Score E Sequences producing significant alignments: (Bits) Value seq1435 96.9 2e-15 >seq1435 Length=478137 Score = 96.9 bits (106), Expect = 2e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 45859 ATTCACTGAACCAAGCAGACAGGCACCATACGGAGGCAGAGGCTGCTCACCACATGGATT 45918 ||| |||||||| | | ||| || ||||| || ||||| || ||||||||||||||||| Sbjct 346869 ATTGACTGAACCCAATAAACAAGCGCCATAGGGCGGCAGTGGTTGCTCACCACATGGATT 346928 Query 45919 CGTTGCTGCAATGGTTTCAAGGAACCAGAGATTGTTCTCCTTGTTGATGCGATCAATGAA 45978 ||||| || |||| ||||||| ||||||| | || | ||||||||| || Sbjct 346929 GGTTGCGCGGATATTTTCGCAGAACCAGTTATTGTTCATTTCATTCACGCGATCAATCAA 346988 Query 45979 GATCACACCGGGTTCAGCGTAGTTGTAGGTG 46009 ||| | ||| || ||||| | | ||||||| Sbjct 346989 GATAAAACCTGGCTCAGCAAAATCGTAGGTG 347019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239958468303785