Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq1524 82.4 1e-10 seq1333 82.4 1e-10 >seq1524 Length=412419 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8660 CTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCC 8719 ||||||||||||||||||||||| |||| ||||| | |||| |||| |||||| |||||| Sbjct 181942 CTCGTTAGTATAGTGGTTAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTCCC 181883 Query 8720 CGACG 8724 |||| Sbjct 181882 GGACG 181878 >seq1333 Length=339980 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 8660 CTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCC 8719 ||||||||||||||||||||||| |||| ||||| | |||| |||| |||||| |||||| Sbjct 60477 CTCGTTAGTATAGTGGTTAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTCCC 60536 Query 8720 CGACG 8724 |||| Sbjct 60537 GGACG 60541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652827132387600