Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq1501 111 2e-19 >seq1501 Length=377221 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 142241 TCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGA 142300 ||||||||||||||||||| ||| ||||| | || || || || | | ||||||| Sbjct 69679 TCTTCGGTCATCAGATGCGATTCGATCTGAACGAGGGATTCCCGCTCGTGACGACGAAGA 69738 Query 142301 AGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACA 142360 || |||||||||||||||||||| | || || ||||||||||| || || ||||| Sbjct 69739 AGGTGCATCTGAAGTCGATCATCCTGGAGCTGCTGTGGTTCCTGCGCGGGGACTCGAACG 69798 Query 142361 TCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCA 142420 |||||| | || || | | | || ||||||||| || ||||| | | || Sbjct 69799 TCAAGTGGTTGCAGGAACGCGGCTGCACGATCTGGGACGAGTGGGCGCGCGAGGACGGTG 69858 Query 142421 ACCTCGGACCTGTCTACGGCAAGCAGTGG 142449 |||| || || || |||||| ||| ||| Sbjct 69859 ACCTGGGGCCGGTGTACGGCGTGCAATGG 69887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500485655240400