Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_027204.1 Length=194701 Score E Sequences producing significant alignments: (Bits) Value seq1501 96.9 4e-15 >seq1501 Length=377221 Score = 96.9 bits (106), Expect = 4e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 176352 ATCATCAGTGTCGGCAAAGCCAACGGTTCGCGTTCAAGCTGTTCCTTCACCTGATCGAAG 176411 |||| || ||||| | || |||| ||||| | ||||| || |||||| |||||| Sbjct 113962 ATCACCATCGTCGGGTACGCATACGGCTCGCGCGCCAGCTGCGTCTGCACCTGCTCGAAG 113903 Query 176412 TGATTGTTATAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGACTTCCAAGCCG 176471 ||||| ||||||||| || || | | ||| | ||||||| ||| ||| Sbjct 113902 TGATTTGCGTAGATGTGGCAGTCCCCGCCCGTCCAGATGAAGTCCCCGAGCCCCAGTCCG 113843 Query 176472 CATTCCAGCGCGATCAGATGTGTCAGGAGTGCGTAAGAGGCGATGTTGAATGGAAGCCCC 176531 |||| | |||| | || || ||||| || ||||| ||||||||||| || | ||| Sbjct 113842 CATTGCTGCGCCAGCATCTGCGTCAGCAGCGCGTAGCTCGCGATGTTGAACGGCACGCCC 113783 Query 176532 AAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTCCCGTTGCGGACATAG 176591 | ||||| |||| || ||||| | | |||| |||| ||||||| || ||| Sbjct 113782 AGGAAGATGTCCGCGCTGCGCTGGTACAGCTGGCACGACAACTTCCCGTCCGCCACGTAG 113723 Query 176592 AACTGGAA 176599 |||||||| Sbjct 113722 AACTGGAA 113715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622898342357400