Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1301 457 1e-123 seq1526 228 1e-54 seq811 185 1e-41 seq368 167 3e-36 >seq1301 Length=515170 Score = 457 bits (506), Expect = 1e-123 Identities = 1369/2080 (66%), Gaps = 46/2080 (2%) Strand=Plus/Plus Query 68404 GTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTT 68463 ||||| | || |||||||| || |||| ||| || |||| ||||| |||||||| Sbjct 331486 GTACGCAAGTAATACATACCAGTCTTCAAACCAAGCTTCCAACCGTAAAAATGCATTGAA 331545 Query 68464 GTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATG 68523 || | || ||| | |||| ||||| || ||||| |||| |||||||||||| ||| Sbjct 331546 GTCAACTTCGAAAAGGTTGGTTCGGCAATGTGAATGTTCAAACTTTGACTTTGATCAATG 331605 Query 68524 AAAGCTCCTCTATCTGCCGCCATTTTTATAAT-ACTCTTTTGAGGAATTTCCCAAATAGT 68582 ||||| || | ||| || |||| | ||||| ||| ||||||| ||||||||||| || Sbjct 331606 AAAGCACCACGATCAGCAGCCAAGTCAATAATGACT-TTTTGAGAAATTTCCCAAACTGT 331664 Query 68583 CTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGATCCACCATC 68639 ||| | | | || | || | || | ||| | | ||||| | || ||||| | Sbjct 331665 CTTGTACAAGTCCTTCAATTCTTGCGGGATGCTGGGAATCTTTTGTACTGAACCACCCGC 331724 Query 68640 GGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAG 68699 | || || |||||| || |||||||||||| || || ||| | | | Sbjct 331725 AGCAATGATGCGATTCTTCATGGATTCATTCCACAATCCCAATTCAGTCAAATCCTTCAT 331784 Query 68700 GAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACT 68759 | | |||| || ||||| ||||| |||| ||| || | |||||||||||| || Sbjct 331785 CAAGTATTGATTGACAATTTGGAATTCACCAGCTAAAACACGACGAGTGTAAATGTTGGA 331844 Query 68760 GGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCAT 68819 || | || || | ||||||| | || |||||||||| || || ||||| ||||| Sbjct 331845 AGTGAAAGGCTCAAAGCATTCATTGTAACCAAGAATTTGAGAGGTAGAAGCAGTCGGCAT 331904 Query 68820 AGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTT 68879 || || | || || ||| | || ||||||| || ||| | || | | | Sbjct 331905 GGGAGCAAGTAACAAGGAATTACGAACACCATGTTCAGAAATCTTAGCCTTCAAAGCTGA 331964 Query 68880 CCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACT 68939 ||||||||| | || || || |||||||| | || ||||| | || || || || Sbjct 331965 CCAATCCCACAAGTCGGAAGGGGTCACATTCCACATGTCATATTGCAAAACACCCTTGCT 332024 Query 68940 TGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGC 68999 || || || |||| ||| ||||||| || ||| | ||||||| || Sbjct 332025 CACAGGGCTACCCGGGTAAGTTTGATAGTGTCCTTCAATTTGAGCCAATTCACAAGAAGC 332084 Query 69000 CTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAG 69059 || || ||||| || || || || || || || | |||||| | | | || | Sbjct 332085 TTCCAAGGCACCATAGTAGATGGTCTCAAAGATTTGCTTATTCAATTGACGAGCGCGTTC 332144 Query 69060 ACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 || ||| ||||| | | ||||| || ||||| || ||||| ||||| |||||||| Sbjct 332145 ACAATCAAATGGCATTCGCATCAGAATGAAAGCATCAGCTAATCCTTGAACTCCAATACC 332204 Query 69120 GATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATC 69179 || || | ||| | | |||| |||| ||| | | || || |||||||| | || Sbjct 332205 AATGGGACGATGACGCATATTAGAACGACGAGCCTGTTCAACTGGGTAATAATTGACGTC 332264 Query 69180 TATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT 69238 || || ||| ||| | | || || || || | || | || | || |||| Sbjct 332265 AATGATACGATTCAAGTTCTTGGTG-ACAACCTTGGCAACATGTTTCAATTCTTTGAAAT 332323 Query 69239 CAAATC-GTCC--ATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTG 69295 |||| || | ||| | ||||| | || || | ||| || | ||| ||||| | Sbjct 332324 CAAAAGTGTTCTTATCCTTGACAAAGGCAGGCAAAGCAATAGAAGCCAAATTGCAAACAG 332383 Query 69296 CTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAG 69355 | | ||||| || | | |||| | || || ||||| | ||| ||||||||| | Sbjct 332384 CAATCTCATCAGGAGCCGAGTATTCAACAATTTCAGTACACAAATTGGAACATTTGATGG 332443 Query 69356 TCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAG 69415 | |||| ||||| ||||| ||||| || || || |||||||| || || | |||| Sbjct 332444 TTCCCAAGTTTTGTTGATTGCTCTTGGAATTGCAAGCATCCTTGTACAGCATGTAAGGAG 332503 Query 69416 TACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG- 69474 |||||||||||| |||||||| | ||||| ||||||| |||| | || Sbjct 332504 TACCAGTTTCAACTTGAGATTCCAAAATAGCATTCCAAAGCTTTTGAGCACGAACAACAC 332563 Query 69475 GTCTTGTAACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCATCTCCCC 69532 | | | | | | || ||||| || || | ||| | ||| ||| |||||| | |||| Sbjct 332564 GACGAGCATGACCT-TCATTTTCGTACTTCTCGTAAAGAGC--TTCAAATTCAGCACCCC 332620 Query 69533 AAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCT 69592 |||||||| ||| ||||||||||||||||| || | | ||||| | || ||| | | Sbjct 332621 AAACATCAGACAAACCAGGACATTCATTTGGGCAGAAGAGGGACCAGTCTTCGTCAGCTT 332680 Query 69593 TAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTA 69651 ||| || ||||| || | ||| |||||| | ||| ||| || | || | | | | Sbjct 332681 CAACACGCTTCATGAACAAATCATTAATCCACAAAGC-ATAGAACAAGTCACGAGCACGA 332739 Query 69652 TTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCAT 69711 |||||| || || || || || || | ||| | ||| || | || |||| ||||| Sbjct 332740 ACTTCTTCCTTCCCAGTGTTCTTCTTCAAATCCAAAAAGTCAAAAACGTCAGCGTGCCAC 332799 Query 69712 GGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTG 69771 ||||| | || | || | | ||||| || ||||| || || ||||| | ||| | Sbjct 332800 GGTTCCAAGTAGACGGCAAAAGCACCCGGACGCTTATTACCACCTTGATCAACGTAACGA 332859 Query 69772 GCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCA 69831 || |||||||| || || | ||||| |||| || |||||| |||| |||||| || ||| Sbjct 332860 GCCGTGTTATTGTAAACACGAAGCATGGGAACAAGACCATTGGATTGACCATTCGTGCCA 332919 Query 69832 GAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATT 69891 ||||| || || || ||||| || ||| | ||| || || || || | Sbjct 332920 GAAATGTACGAACCAGCAGCACGAATGTTGTGAATGTTCAAACCAATACCACCAGCAGAT 332979 Query 69892 TTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATC 69951 || || || | ||||||| || || || ||||| ||||| || || ||||| | Sbjct 332980 TTGGAAATCAAAGCACAAGTCTTTAAAGTTTCATAAATACCATCAATCGAGTCATCAGAC 333039 Query 69952 AT-GTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 || || || ||| || || ||||| |||| |||| |||| || |||| || | || Sbjct 333040 ATCGTCAACAAG-AAGCAAGAAGACAGTTGAGGATGATTAGTACCGGCATGGAAGAGGGT 333098 Query 70011 AGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTC 70070 || || ||||||| || | |||||| | | |||||| | ||||||||| || || Sbjct 333099 GGGTGAACCGTGAGTAAAATACTTTTCACTCATGAAATTGTACGATTCAATAGCCGAGTC 333158 Query 70071 TATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTA 70129 || || || | || |||||||| |||||||| | ||| || ||||| ||||| | Sbjct 333159 AATGTCAGTACCG-TGCATTCCTATGCAAACACGCATGAGCATGTGTTGAGGACGTTCAA 333217 Query 70130 C--CGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATA 70187 | || | | ||| ||||||| || ||||| ||| ||||| || || ||||| || Sbjct 333218 CGACGCGT--TCATTAATTTTCATCAAGTATGCACGTTCAAGAGTCTTGAAACCAAAGTA 333275 Query 70188 GTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTG 70245 ||||| || || || | ||||| || || | || || | ||| | ||| Sbjct 333276 ATTGTAATTGTAA--TCACGATCGTAGATGATGGCGGAGTTCAAACGATC---AGCATTG 333330 Query 70246 G---TAACTATATCCATAACAGTAGG--TGAGATAATCGGAGATCGTTTACCAT--TTTT 70298 | | || ||| | || ||| | |||| | | | | | | | | | || Sbjct 333331 GCCATGACAGTATTGA----AGAAGGCTTCCGATACTTTGGGTTGATGTTGCTTGGTCTT 333386 Query 70299 AGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTT 70358 || |||| |||||| | || ||| | ||| || ||| |||| | |||||||| Sbjct 333387 GGGGTTAATGTAGTTGTACAAGCTTTCAACGACAACAGAGAATTGTTTAGTAGTTTCCTT 333446 Query 70359 GTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGT 70418 || || || ||||| || | || || ||||| |||||||||||||| | ||||| Sbjct 333447 TTGCAAGTTACTAATGGCAATACGAGCAGCCAGAATGGCATAGTCAGGATGCTTGGTAGT 333506 Query 70419 ACAAGT-AGCTGCTATTTCCGCAGCTAACGTATCTAATTC 70457 ||||| ||| || | || ||||| || |||| ||||| Sbjct 333507 -CAAGTAAGCAGCAGTCTCAGCAGCCAAGTTATCCAATTC 333545 >seq1526 Length=132622 Score = 228 bits (252), Expect = 1e-54 Identities = 634/967 (66%), Gaps = 14/967 (1%) Strand=Plus/Plus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGTGACATAACTCCCATTTTTTG 39330 |||||||||| |||| | || ||| || |||||||||||| || || ||||| Sbjct 118343 TTAAAAGTCAGCATCAAGAGTGAAAATCTT---TTCTTGTGACATGACACCAGCCTTTTG 118399 Query 39331 GTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCAT 39390 ||| |||||||| || || || || ||||| || |||| ||| || || ||||| Sbjct 118400 GTACTCACCAACCTTCTTTTCAAAGAAGTTAGTCTTTCCTTGCAAGGAAATCAAGTCCAT 118459 Query 39391 GAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAATCT 39450 |||||| || ||||| | |||| || ||| | | | | ||| | Sbjct 118460 GAAATCGAAAGGATTGTCTACATTGTAAAATTTGGGGCACTGCAGGGCAACCAACAAGCG 118519 Query 39451 ATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAAC 39510 ||| ||||||||||| ||||| ||| | | |||||||| || || | ||| Sbjct 118520 ATCAGCAACAAATTCAATGTACTGGCACATGAGAGCGCAATTCATGCCAATCAAAGCAAC 118579 Query 39511 TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGATGT 39570 || | |||||||| || || || | ||| || | || || || || || || || Sbjct 118580 GGGCAAGGCCTCCGTCAGGAATTCCTGTTCAATCTTGACAGCTTCCGTAATGATGTGAGT 118639 Query 39571 TACTACCTCATCACTCGGTGGA---TGCAATAAATGTTTAAACATTAAGCAGGCGAAGTC 39627 || ||||| || || || || || | || | || ||||| || || Sbjct 118640 TATAGTGGCATCAGAAGGACGAGTGTGACGCAAGTGCCTGAATAACAAACAGGCAAAATC 118699 Query 39628 ACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAG 39687 |||||| || || || || | || |||| ||| || || || || | || ||||| | Sbjct 118700 ACAATGAAGACCTTCGTCACGGCTGATTAGTTCATTGGAGAAGGTCAAACCGGGCATCAA 118759 Query 39688 ACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 || ||||| || | ||| || ||||||||||| || || ||||||||||| ||||| || Sbjct 118760 CCCGCGCTTCTTCAACCAGAAAATGGCAGCAAATGAACCGGAAAAGAAGATACCTTCCAC 118819 Query 39748 TGCTGCAAATGCAACAAGTCTCTCTCCGTAA---CTTGTATCATTATGTATCCACTTCTG 39804 || ||||| |||||||| | ||||| || || || | ||| | ||||| | Sbjct 118820 GGCAGCAAAAGCAACAAGGCGTTCTCCAAAACAGCTAGTTTGATTTTCAATCCAACGCAT 118879 Query 39805 TGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATG 39864 ||||| || | ||||| |||||||| || || || || ||||| || || | | Sbjct 118880 AGCCCAGTCTCCCTTCTTGCGAACACAAGGGATGGTGTCAATGGCATTGAAAAGGAATTT 118939 Query 39865 TTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGAT 39924 ||| | || || || ||||| || | ||| |||||||| | || || Sbjct 118940 ACGCTCAACTGGGTCACGAATGTAGGTATCAATGAGGAGAGAGTACATTTCAGCGTGAAT 118999 Query 39925 GTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC-TG 39983 |||||||||| || || || |||||||| || | ||||| | || ||| || || || Sbjct 119000 GTTTTCAATCATGATTTGGAACCCGTAAAAGCAACGAGCTTCTGGAACTTGAACTTCTTG 119059 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 | ||| | |||| |||||||| || || |||||| || ||||| || |||| Sbjct 119060 TGCGAAA-CGAGTAACCAAGTTTTCATTGACAATACCATCAGAGGCAGCAAAGAAAGCCA 119118 Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAA---TTTATTCCAGTCATTGATAT 40100 | ||| | || ||| || ||||||| ||||| || | ||| | || || | Sbjct 119119 AAACACGAGAAACAAAGAATCGTTCATCGTTAGTCAACTTTTCGTCCCAATGTTTTATGT 119178 Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGT 40160 | || || | || |||||||| || ||||| || || || || ||||| ||||| | | Sbjct 119179 CCTTGGAAAGGTCAACTTCTTCGGCAGTCCAGAAGGAAGCTTCAGCCTTCTTGTAGAATT 119238 Query 40161 TCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGA 40220 ||| ||||| |||| | || ||||| | || || | || ||||| | || | Sbjct 119239 GCCAAATATCGTGATACTTGATGGGAAAGAGGACGAAACGGTTGGGATTGGCCTCGAGAA 119298 Query 40221 TGGGTTC 40227 ||||||| Sbjct 119299 TGGGTTC 119305 >seq811 Length=1194 Score = 185 bits (204), Expect = 1e-41 Identities = 284/394 (72%), Gaps = 11/394 (3%) Strand=Plus/Plus Query 39841 TTCTATAGCATTAAAGAGATAATGTTTT-TCATCACTATCTTTAACATATGTATCTATTA 39899 ||||| ||||||||| | || |||||| ||| | ||||||||| || ||||| |||| Sbjct 41 TTCTAAAGCATTAAACA-ATTCTGTTTTCTCAGCTTCATCTTTAACGTAAGTATCAATTA 99 Query 39900 ACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATC 39959 | | | |||| |||| || |||||||| ||| ||||| || || || ||| | Sbjct 100 ATAAAGAATACGTTTCGCTGTGAATGTTTTCCATCATAATCTGGAAACCATAGAAAAACT 159 Query 39960 TTGCTTCAGTAATTTGTACCTC-TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 | ||||||| | ||| || || | ||||| | | || ||||| |||||||| || ||| Sbjct 160 TCGCTTCAGCATATTGAACTTCGTTTACAAAGT-TCTCAGCCAAGTTTTCATTTACGATT 218 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078 || ||| ||| ||||| ||||| || | ||||||||| |||||| |||||||| || Sbjct 219 CCGTCAGAAGCTGCAAAGAATGCTAAAATATGTTTAATGAAATATCTTTCATCGTCATTC 278 Query 40079 AATTT---ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA-AAA 40134 | ||| |||||| || | | ||||| | ||| | ||||||||| ||||| ||| Sbjct 279 AGTTTGTTATTCCAATCTGTCAAATCTTGGTGCAAATCGATTTCTTCAGCAGTCCAGAAA 338 Query 40135 CGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAAC 40194 | | || || ||||| ||| | ||| |||||| ||| || || ||||||||||| Sbjct 339 CTA-GCTTCCATTTTTTTATACCATTCCCAAATATCATGATGTTTGATAGGAAAAATAAC 397 Query 40195 AAATCTATTTGGATTTT-TTGCAAGGATGGGTTC 40227 || | |||| ||||| ||| || ||| ||||| Sbjct 398 GAAACGATTTTTATTTTCTTGTAA-GATTGGTTC 430 >seq368 Length=262043 Score = 167 bits (184), Expect = 3e-36 Identities = 390/579 (67%), Gaps = 11/579 (2%) Strand=Plus/Plus Query 39638 CCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTT 39697 ||||| || | ||||| | ||||| ||||| | || |||||||||| ||| ||||| Sbjct 28308 CCCTCGTCCCGGCTAATAAGCTCGTTTGAAAAGCTTAGACCAGGCATTAAACCGCGCTTC 28367 Query 39698 TTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAA 39756 ||||||||||| |||| |||| || || ||||| || || |||||||| ||||| ||||| Sbjct 28368 TTGAGCCAAAAGATGG-AGCAGAATGAGCCAGAGAAAAAAATGCCTTCAACTGCAGCAAA 28426 Query 39757 TGCAACAAGTCTCTCTCCGTA--ACTTGTATCAT-TATGTATCCACTTCTGTGCCCAATC 39813 || | ||| | ||| || | | | | || ||||||| | ||||| | Sbjct 28427 GGCCAAAAGCCGTTCTGGATAGGAAGAGACCCGTGGATCGCACCACTTCAGAGCCCAGTG 28486 Query 39814 AGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTC-AT 39872 ||||| || | || ||||| || || || |||||| | |||| | || || || Sbjct 28487 CGCTTTTTTGGTGACGCAAGGGATAGTCTCGATAGCACGTAGTAGATGGTCCTTCTCAAT 28546 Query 39873 CACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAA 39932 | | ||||| | ||| || || || || || |||| ||| || || || || || | Sbjct 28547 CGC-GTCTTTGATATACGTGTCAATCAAAAGCGAGTACACTTCCGAGTGTATATTCTCGA 28605 Query 39933 TCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC--TGAACAAAA 39990 | || || ||||| |||||||| || | || || | | || || || || ||| Sbjct 28606 TTGCGATTTGAAACCCGTAAAAGCAGCGAGCCTCTGGCACCTGCACTTCGTTGCTAAAAT 28665 Query 39991 TCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATG 40050 || | || | |||||||||||| || || |||||||| ||||| || || | ||||| Sbjct 28666 TCAT--GGCTAGATTTTCATTCACGATGCCGTCACTAGCAGCAAAGAAAGCGAGCACATG 28723 Query 40051 TTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATAT 40110 ||||| ||||| || | | || | || ||| || || | ||| | | Sbjct 28724 CTTAATGAAATAACGCTCGTTGTCCGTGAGGCTAGCCCAATCTTTCAGATCGTGCACCAG 28783 Query 40111 ATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATC 40170 ||| | ||| ||||||||||| || || || || || || |||||||| | ||| | || Sbjct 28784 ATCGAGTTCCTCAGCTGTCCAGAAAGAAGCTTCAGCTTTCTTGTACATCTGCCACACTTC 28843 Query 40171 ACGATATTGTATTGGAAAAATAACAAATCTATTTGGATT 40209 | | || || ||||| | ||||| | ||| | ||| Sbjct 28844 GTGCTCCTGAATGGGAAAGAGCACAAAGCGATTGGAATT 28882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686890210530600