Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_027332.1 Length=98170 Score E Sequences producing significant alignments: (Bits) Value seq1435 82.4 5e-11 >seq1435 Length=478137 Score = 82.4 bits (90), Expect = 5e-11 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 19336 GCCGAATTAGCTCAGTTGGTAGAGCAGCGCACTTGTAATGCGAAGGTC 19383 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 92503 GCCGGATTAGCTCAGTTGGTAGAGCAGCGCACTTGTAATGCGAAGGTC 92456 Score = 82.4 bits (90), Expect = 5e-11 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 19336 GCCGAATTAGCTCAGTTGGTAGAGCAGCGCACTTGTAATGCGAAGGTC 19383 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 95769 GCCGGATTAGCTCAGTTGGTAGAGCAGCGCACTTGTAATGCGAAGGTC 95722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314010914309015