Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq1501 125 1e-23 >seq1501 Length=377221 Score = 125 bits (138), Expect = 1e-23 Identities = 190/268 (71%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 198332 TCATGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCG 198391 || || ||||| || || ||||| ||||| | ||||| ||||||||||||||||||||| Sbjct 113745 TCGTGCCAGCTGTACCAGCGCAGCGCGGACATCTTCCTGGGCGTGCCGTTCAACATCGCG 113804 Query 198392 TCTTACGCATTACTCGTGCACATGGTTGCCCAGCAG-GTTAACATGGTGCCGGGCGATTT 198450 ||||| | || ||| ||| | || ||||| | || ||| || || || || Sbjct 113805 AGCTACGCGCTGCTGACGCAGATGCTGGCGCAGCAATGCGGAC-TGGGGCTCGGGGACTT 113863 Query 198451 CATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGCTCCA 198510 ||| ||||||||||| ||| || ||||| | ||||| | ||||||| || || Sbjct 113864 CATCTGGACGGGCGGGGACTGCCACATCTACGCAAATCACTTCGAGCAGGTGCAGACGCA 113923 Query 198511 GCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCTAT 198570 |||| |||| ||||||| | | |||| || | |||||||| | |||| || || Sbjct 113924 GCTGGCGCGCGAGCCGTATGCGTACCCGACGATGGTGATCAAGCGCCAGCCGGCGTCGAT 113983 Query 198571 CTTCGATTATAAATTCGAAGATTTTGAG 198598 |||||| || | ||||| || || ||| Sbjct 113984 CTTCGACTACGAGTTCGAGGACTTCGAG 114011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769172783698200