Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1525 89.7 4e-13 >seq1525 Length=339361 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 111720 GTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACC 111779 |||||| | |||| || | ||| || ||||| || || ||||| | || | | ||| Sbjct 147639 GTGATTGGAGTAAATGTGGGTATCACCCATACAGTGAATGAATTCTCCCGGTTGTAGACC 147580 Query 111780 AGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACC 111839 ||||| || ||||||||| || |||| ||| |||||| || || ||||| || Sbjct 147579 AGTGACATGAGCAATCATGATCGTCAGTAACGAATAAGAAGCAATATTGAAAGGCACCCC 147520 Query 111840 TAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACATA 111899 || ||| ||||| | ||| || || | | || || | ||| | | ||||| Sbjct 147519 TAAGCCGATATCACAACTTCTCTGGTACATCAAGCACGACAATTTCCCGTCTTGAACATA 147460 Query 111900 AAATTGACAAAGTACATGACAAGGAGGCAATGCCATCCCATTCA 111943 ||||||||||| | || ||||||||||| |||||| ||||| Sbjct 147459 AAATTGACAAAACATGTGGCAAGGAGGCAACGCCATCAAATTCA 147416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391935258147895