Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq1501 100 1e-16 >seq1501 Length=377221 Score = 100 bits (110), Expect = 1e-16 Identities = 122/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 53678 TCATCGCGGTACACGAACATGACGATGTCGGCGTCTTGCTCAATGGCGCCGGACTCGCGC 53737 || |||||||| | |||||||| |||||| ||||| ||||| |||||||| ||||||||| Sbjct 328573 TCGTCGCGGTAGATGAACATGATGATGTCCGCGTCCTGCTCGATGGCGCCCGACTCGCGC 328632 Query 53738 AGGTCGCTGAGGACCGGACGCTTGTCGGGGCGAGACTCGCACC-CTCGGTTTAGCTGGCA 53796 |||||| | | |||||||||||| || || | || |||| ||||| ||||| | Sbjct 328633 AGGTCGGACATCATCGGACGCTTGTCCGGCCGCGTTTC-CACCGAGCGGTTCAGCTGCGA 328691 Query 53797 GAGGGGAAGCACAGGACACCCAATCTCCCTTGCCAACAGCTTCA 53840 || | | ||| || || | | |||| | |||| | ||||| Sbjct 328692 CAGCGCGATCACCGGGCAGCGCAGCTCCTTGGCCAGCGCCTTCA 328735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194814191320130