Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_028936.1 Length=59052 Score E Sequences producing significant alignments: (Bits) Value seq1612 96.9 1e-15 >seq1612 Length=217819 Score = 96.9 bits (106), Expect = 1e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 53446 CATCACAACTACACGCAGAAGGAAACTCACGGCGGCCGTGAGGTGTGGTTGACCCGCAAG 53505 || ||||||||| ||||||||| || ||| ||||| || |||| ||||||||||| Sbjct 127775 CACCACAACTACGTGCAGAAGGAGACCCACTTCGGCCAGGACGTGTTCGTGACCCGCAAG 127834 Query 53506 GGTGCGATCGACGCGAACAAGGGGGTGCGGGGGCTGATTCCCGGCAGCATGGGCACCCGC 53565 || ||| | |||||| |||| | |||| | |||||||||||||||||| | ||| Sbjct 127835 GGCGCGGTGAGCGCGAAGCAGGGCCAGATGGGGATCATTCCCGGCAGCATGGGCGCGCGC 127894 Query 53566 TCGTATGTCGTCACCGGCAAGGGCAA 53591 || |||| |||||||||||| Sbjct 127895 AGCTACATCGTGCGCGGCAAGGGCAA 127920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188839944918220