Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq1501 89.7 7e-13 >seq1501 Length=377221 Score = 89.7 bits (98), Expect = 7e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 181319 GATCATCAGTGTCGGCAAAGCCAACGGTTCGCGGTCAAGCTGTTCCTTCACCTGATCGAA 181378 ||||| || ||||| | || |||| ||||| | ||||| || |||||| ||||| Sbjct 113963 GATCACCATCGTCGGGTACGCATACGGCTCGCGCGCCAGCTGCGTCTGCACCTGCTCGAA 113904 Query 181379 GTGATTGTTGTAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGACTTCAAGACC 181438 |||||| |||||||||| || || | | ||| | ||||||| | || || Sbjct 113903 GTGATTTGCGTAGATGTGGCAGTCCCCGCCCGTCCAGATGAAGTCCCCGAGCCCCAGTCC 113844 Query 181439 ACATTCCAGCGCGATCAGATGTGTCAGGAGCGCGTAAGAGGCGATGTTGAAGGGAAGCCC 181498 |||| | |||| | || || ||||| |||||||| ||||||||||| || | || Sbjct 113843 GCATTGCTGCGCCAGCATCTGCGTCAGCAGCGCGTAGCTCGCGATGTTGAACGGCACGCC 113784 Query 181499 CAAGAAGACGTCCACGGACCGCTG 181522 || ||||| |||| || ||||| Sbjct 113783 CAGGAAGATGTCCGCGCTGCGCTG 113760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661335702118200