Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq100 1305 0.0 >seq100 Length=112360 Score = 1305 bits (1446), Expect = 0.0 Identities = 2485/3637 (68%), Gaps = 118/3637 (3%) Strand=Plus/Plus Query 183623 ACTGGCAGTCTTTGGATGACAGATATAGCACATCATCACCTAGCAATAGCAGTTATGTTT 183682 ||||| ||| | ||| | || ||| |||| ||||||||| ||||||| || || | ||| Sbjct 73688 ACTGGAAGTTTATGGTTAACTGATGTAGCTCATCATCACTTAGCAATCGCTATTTTATTT 73747 Query 183683 ATCATTGCAGGTCATATGTATCGCACAAACTGGGGTATTGGTCAATCAATGAAAGAGATA 183742 || | ||||||||||||||| | ||||||| ||||| ||||| || ||||| || Sbjct 73748 ATTGTGGCAGGTCATATGTATAGAACAAACTTTGGTATAGGTCATAGTATCAAAGAAATT 73807 Query 183743 TTAGATGGTCAGAATGG----TTTCCCACAGGGTGTCACACACAGAGGATTATATGAATT 183798 ||||| | || ||||| ||| || || | || | ||| || |||||| | Sbjct 73808 TTAGAAGCGCATAATGGACCATTT---ACTGGAAATGGG-CATAAAGGTTTGTATGAAAT 73863 Query 183799 TCTAGCAGAATCAAGACATGCACAACTATCACTGAATCTGGCAATGCTAGGATCTATCAG 183858 | || || |||| | ||||| |||||| | | ||| | |||| |||| ||| | | Sbjct 73864 TTTAACAACATCATGGCATGCTCAACTAGCTGTTAATTTAGCAACCTTAGGTTCTTTAAC 73923 Query 183859 TATCATAGTTTCACATCATATGTATGCAATGCCACCTTATCCATATCTTGGTATTGAATA 183918 || ||||| | || |||||||| | ||||| |||||||| ||| | ||||| || Sbjct 73924 AATTGTAGTTGCTCACCATATGTACTCGATGCCTCCTTATCCTTATATATCAATTGACTA 73983 Query 183919 TCCAACAGTAGTAGGATTATTCACCCATCATATGTGGATAGGTGGTTTTCTTATTGTGGG 183978 ||| ||| || |||||| || || ||||||||||| || | |||| |||||| || Sbjct 73984 TCCTACACAGCTATCATTATTTACACACCATATGTGGATTGGAGCTTTTTGTATTGTTGG 74043 Query 183979 TGCATCAGCACATGCTTCAATTGCTATGATAAGAGACTATAATCCTGTTCAACATATGGG 184038 |||| | || |||||||| ||| ||| || |||| ||| || || | | || | Sbjct 74044 TGCAGCTGCGCATGCTTCCATTTACATGGTACGAGATTATGATGCTTCCCTAAATTTTAA 74103 Query 184039 AAATGTATTAGATAGA---ATACTTAAATCTAGAGATGCAATCATCAGTCACTTGAACTG 184095 ||| |||||||| | |||| | ||||||||| || || ||| || || || Sbjct 74104 TAATTTATTAGATCGCGTTATACGCCA---TAGAGATGCCATTATATCTCATTTAAATTG 74160 Query 184096 GGTATGCATCTTTTTAGGTTTTCATAGTTTTGGTCTTTATATTCACAATGATATTATGAG 184155 ||||||||| |||||||| ||||||||||||||| | |||||||| ||||||| ||| Sbjct 74161 GGTATGCATTTTTTTAGGATTTCATAGTTTTGGTTTATATATTCATAATGATACAATGCA 74220 Query 184156 AGCATTGGGTAGACCTAATGATCTATTCAGTGATACAGCAATACAATTACAACCTGTATT 184215 ||| | || | | | ||| | || |||| ||| || |||||| ||| | || Sbjct 74221 AGCTCTTGGACGTTATCAAGATATGTTTTCAGATAAAGCTATTTCATTACAGCCTATTTT 74280 Query 184216 TGCACAGTCTGTTCAGAGATTACATGCTTCATTATATAATGT---------------CTC 184260 ||| || | |||| | | ||| ||||| | ||||| | | Sbjct 74281 TGCTCAATGGATTCAAGAACTTCATAGTTCATCAATAAATGTAACAGCTCCAAACTCCAC 74340 Query 184261 TG------------ATGTATTTGGTGGATCAACCACAATGGTTGGTGGTAAGATTGCTAA 184308 || || | ||||| ||| | | | || | ||| ||||||| Sbjct 74341 TGGGCTTGCAAGCTATATCTTTGGAGGAACTATTTTAGCTATTAATTCTAAAATTGCTAT 74400 Query 184309 TGCTCCTTTTGTACT-AGGTACAGCAGACTTTATGATACATCACATACACGCTTTCCAGA 184367 ||||| | | ||| ||| |||||||| ||| | | ||||| || || ||||| | Sbjct 74401 AGCTCCAAT-GAACTTAGGAACAGCAGATTTTCTAGTTCATCATATTCATGCTTTTACTA 74459 Query 184368 TTCATGTTTGTGTATTAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAA 184427 |||||||| ||||||| | | || || ||||||| | |||||||| ||||| Sbjct 74460 TTCATGTTACGACATTAATTTTATTAAAAGGATTTTTATATGCAAGAAACTCTAGATTAA 74519 Query 184428 TACCAGATAAGAGTAAGTTAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCA 184487 | || || || ||| |||||||| |||| || ||||||||||| || |||||||| | Sbjct 74520 TTCCTGACAAATCTAATTTAGGATTTCGATTTCCATGTGATGGTCCAGGAAGAGGAGGAA 74579 Query 184488 CTTGTCAGGTATCAGGATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCA 184547 |||| || ||||||| |||||||| | || | || ||||| |||||||||||||| | Sbjct 74580 CTTGCCAAGTATCAGCTTGGGATCACATTTTTTTAGGGTTATTTTGGATGTATAATTGTA 74639 Query 184548 TCTCTATAGTAATCTTCCACTTTAGTTGGAGAATGCAA---GATGTATGGGGT------- 184597 | ||| | ||||| || |||||||| |||| ||||||| ||| | ||||| Sbjct 74640 TTTCTGTTGTAATTTTTCACTTTAGCTGGAAAATGCAATCTGATATTTGGGGAACTTTAA 74699 Query 184598 ---------------------CTAT--CAGGAGGTAACTTTGCTCAGAGTTCAATTACAA 184634 |||| ||| || || || || ||| | | | |||| Sbjct 74700 CATCTCAAGGAAATATATCAGCTATTACAGCTGGAAATTTCGCGCAGGGAGCTTTAACAA 74759 Query 184635 TCAATGGATGGTTGAGAGACTTCTTATGGTCACAGTCAAGTCAAGTTCTCAATAGTTATG 184694 | ||||||||| | |||| || | |||||||| | ||| || | | ||||| Sbjct 74760 TTAATGGATGGCTACGAGATTTTCTTTGGTCACAAGCTTCTCAGGTAATTCAGTCTTATG 74819 Query 184695 GA-CAAGACAT-CAGCATGTATGGTTTGCTATTTCTTGGAGCACATTTTGTATGGGCATT 184752 | || | | |||| | ||||||| | ||| | |||||||||||| | |||||||| Sbjct 74820 GGTCATCTCTTTCAGCTT--ATGGTTTAATTTTTTTAGGAGCACATTTTATTTGGGCATT 74877 Query 184753 CAGTTTGATGTTCCTATGGAGTGGTAGAGGATACTGGCAAGAGTTGATAGAGTCTATTGC 184812 ||||| ||||| ||| ||||| ||||||| ||||||||| | || || || || Sbjct 74878 TAGTTTAATGTTTTTATTTAGTGGACGAGGATATTGGCAAGAGCTAATTGAATCAGTTTT 74937 Query 184813 TTGGGCACATAACAAATTAAAACTTGCACCTACCATTCAACCAAGAGCAATGTCAATTAC 184872 ||||| |||| ||||||||| | || ||| | ||||||||||||||| | || || Sbjct 74938 ATGGGCGCATAGTAAATTAAAATTAGCCCCTTCTATTCAACCAAGAGCATTAAGTATAAC 74997 Query 184873 ACAAGGACGTGCTGTTGGAGTTGCACACTTCTTACTTGGAGGTATTGCCACAACATGGGC 184932 |||||| || ||||| || ||||||||| ||||| || ||||||| ||||||||||| Sbjct 74998 ACAAGGTCGAGCTGTAGGTCTTGCACACTATTTACTAGGTGGTATTGGAACAACATGGGC 75057 Query 184933 ATTCTTCTTTGCTCACCTTATCCCCTTAAGTTAA----ATCATGGCTACTAAAACAAAAT 184988 || || | ||| |||| | ||| |||| | | | || | || ||||| Sbjct 75058 CTTTTTTCTAGCTAGAATTATATCAGTAACTTAACGATAGCTTATATATGACAATAAAAT 75117 Query 184989 TTCCAAAATTTAATCAAGATTT--GGCAAGTGATCCTACAACTAGGAGATTGTGGTATGG 185046 |||||| |||||||||| |||| | |||| |||| || ||||| ||| | |||||||| Sbjct 75118 TTCCAACATTTAATCAAAATTTAAGTCAAG--ATCCAACTACTAGAAGAATTTGGTATGG 75175 Query 185047 ATTAGCAACTGCACATGACTTTGAGAGTCATGACAATATGACAGAAGAGAAGTTATATCA 185106 | | ||||| || || || || ||| |||||| ||| | | || | | | || | Sbjct 75176 AATTGCAACAGCGCACGATTTAGAGTCTCATGATAATGTTTCTGACCAAGATCTTTACCC 75235 Query 185107 AAAATTATTTGCTACACACTTTGGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAA 185166 ||| | ||||| | || ||||| ||| | || ||||| ||| ||||| ||||| || Sbjct 75236 TAAAATTTTTGCATCTCATTTTGGGCATTTGGCCATTATTTTTTTATGGACAGCAGGAAA 75295 Query 185167 TTTAATTCATATAGCATGGCAAGGTAACTTTGAACAGTTTGTAGCAGACCCACAACATGT 185226 | | ||||||| || |||||||| || |||||| | | | | | || | | | Sbjct 75296 TCTTTTTCATATTGCTTGGCAAGGAAATTTTGAAGAATGGATTCAAAATCCTTTAAAAAT 75355 Query 185227 GATACCTATAGCACATAGAATATGGGATCCTCATTTTGGTCA---AGGTGCAACAGATGC 185283 | ||||| |||||| || ||||||||||||||| | | | || || | | Sbjct 75356 AAAGCCTATTGCACATGCTATTTGGGATCCTCATTTTAATGATACAAGTTTAAAAATT-- 75413 Query 185284 ATACACACAGGCAGGTTCTACTTTTCCTGTGAACAGATTGTATTCTGGACTGTATCATTG 185343 | ||| | || | | || ||| || | | ||||| || ||| | || Sbjct 75414 -TTTACAAAATTTGGAACAAATTATCCATCTAATATTTCAACCTCTGGTCTTTATGAATG 75472 Query 185344 GTGGTACACAGTTGGTATGAGAACTAATATGCAACTGTATA---CTGGTGGTGCATTTAT 185400 |||||||||| |||| | ||| | | | | || | || || | || |||| Sbjct 75473 GTGGTACACAATTGGATTTAGATCAAGCGAGGAGCTATTTAAAGCTTCTTTTGG-TTTA- 75530 Query 185401 GATTCTACTAGCATTGGTATCTTTACTTGGTGCTCAATTACATCTGAAACCAAAGTTTGC 185460 ||||| || || || | ||||| | | | | ||| | | ||| |||| Sbjct 75531 -ATTCTTTTAAGTTTCGTTTTTTTACAAGCAGGTTGGCTTCATTTACAGCCATCGTTTAA 75589 Query 185461 ACCTAAGCTTGCTTGGTTTAAAGATAATGAGAACA-GATTAAATCATCATCTATCAGTTC 185519 ||| | | |||||||||| ||||||| | || | ||||||||||| || ||| Sbjct 75590 GCCTTCAGTGGATTGGTTTAAAAATAATGA-ATCACGCCTAAATCATCATTTAGCAGGAT 75648 Query 185520 TATTTGGATTCAGTTCTATTGCATGGGCTGGTCATTTGATACACGTAGCAATACCTGCAT 185579 ||||||| | ||||||||||| ||| | || |||||| | || ||||| || || || Sbjct 75649 TATTTGGGGTTAGTTCTATTGCTTGGACAGGCCATTTGGTTCATGTAGCGATTCCAAGAT 75708 Query 185580 CAAGAGGAATCACTGTAGATTGGACTAATTATGTGT-TTATGAAACCTCATCCTGCAGGT 185638 |||| || ||| | ||||||| ||||| | | | |||| | || ||||| || || Sbjct 75709 CAAGGGGTATCCAAATTGATTGGAATAATTTTCTTTCTTATTTA-CCACATCCGGCTGGA 75767 Query 185639 TTACTGCCATTCTTTACAGGAAACTGGGGTGTTTATGCACAAAATCCTGATGGATTAAAT 185698 | | || || ||| | || || ||| || |||||| ||||| | |||| || | Sbjct 75768 CTTCAACCTTTTTTTTCTGGGAATTGGTCAGTCTATGCAGAAAATTCAGATGATTTTTCT 75827 Query 185699 CAAATATTCAATACAACAGAGGGTTCTGGAACAGCAATATTAACATTCATGGGTGGTTTC 185758 || || || ||||| || | || | || |||||||| ||||| || | || ||||| Sbjct 75828 CATATTTTTAATACTACGAAAGGAGCAGGTACAGCAATTTTAACCTTTAATGGAGGTTTT 75887 Query 185759 CATCCACAAACAGAGGCATTATGGTTGACTGATATAGCACATCATCACCTTGCAATAGGA 185818 || |||||||| | | |||||||| |||||||||| || ||||| | || || || Sbjct 75888 CACCCACAAACTCAATCTTTATGGTTATCTGATATAGCGCACCATCATTTAGCTATTGGT 75947 Query 185819 GTAATATTCATTATTGCAGGTCATATGTATAGAAGTGCTTGGGGTATTGGTCACTCAATG 185878 || |||| || |||||||||||||||||||||| || ||||| ||||| | Sbjct 75948 GTTTTATTTATCATTGCAGGTCATATGTATAGAACAAATTTTGGTATAGGTCATAGTTTT 76007 Query 185879 AAGGAGATACTTGAAGCACATACACCACCAAGAGGAGGACTAGGTGCAGGTCATAAAGGA 185938 || || || | || || ||| || ||| |||| || |||| ||| ||| ||| Sbjct 76008 AAAGAAATTTTAGACGCGCATTGTCCGCCAGAAGGAAGATTAGGAAAAGGGCATGTTGGA 76067 Query 185939 TTATATGAAACAGTTACAGACTCATTACACCTACAGTTAGGTCTTGCACTTGCATCTCTA 185998 ||||||||||| || ||| | || | || | || |||| | || | || || || Sbjct 76068 TTATATGAAACGGTAACAAATTCGCTTCATATGCAACTAGGCTTAGCCTTAGCTTCATTA 76127 Query 185999 GGTGTTGTTACTAGTCTGGTGGCACAACATATGTACTCAATGCCATCCT-ATGCTTTCAT 186057 || ||| | ||| | | || ||||||||||| || || | ||||| |||| ||| | Sbjct 76128 GGGGTTATAACTTCTTTAGTAGCACAACATATTTATTCTTTAA-ATCCTTATGCATTCCT 76186 Query 186058 AGCACAGGCGCATACTACGCAAGCTGCTCTATATGTTCATCATCAATACATTGCAACTGC 186117 || | || || |||| ||| ||||| ||||||||||| |||||| | Sbjct 76187 CTCAAAAAATTATGTAACAGAAGCAGCTTTATATACACATCATCAATATATTGCAGGTTT 76246 Query 186118 TCTGATGGTTGGTGCTTTTGCGCATGGAGCAATATTTTTTGTTAGAGACTTTGATCCTAC 186177 | | ||| | || |||||||| |||||||| || |||||||| ||||| | |||||| Sbjct 76247 TTTAATGATAGGAGCTTTTGCACATGGAGCCATCTTTTTTGTAAGAGATTATGATCCACA 76306 Query 186178 TCTGAATAAGGACAATGTTCTTGATAGAATGCTACAGCACAAAGAAGCAATTATAAGTCA 186237 | ||||| | |||||||| | |||||| || | || |||||||||||||| ||| Sbjct 76307 AATAAATAAAAATAATGTTCTAGCAAGAATGTTAGATCATAAAGAAGCAATTATTTCTCA 76366 Query 186238 CTTAAGTTGGGTATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGA 186297 | |||| ||||| || |||| | || || || || |||| | || || |||||||| Sbjct 76367 CCTAAGCTGGGTTTCTTTATTTTTAGGTTTTCACACCCTAGGTTTATACGTTCATAATGA 76426 Query 186298 TGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACA 186357 ||| || | || |||||||| || || | ||| |||||||| || ||| ||||||| || Sbjct 76427 TGTTGTTGTAGCTTTTGGTCAACCAGAAAAACAAATATTAATAGAGCCTGTATTTGCTCA 76486 Query 186358 GTGGATACAGGCAGCATCAGGTAAGATGATGTATGGATTAAGTTTCTTACTATCTGATCC 186417 | || || | | || || || | | |||||| | ||| ||| |||| |||| Sbjct 76487 GCTAATTCAATCTTCTTCTGGAAAACTTTTATATGGAGGTAATTTTTTATTATCAGATCA 76546 Query 186418 AAATAGTGCTGCAAGTCTAGCAGCAGAGAGTATGCCTGGTAATCATTACTGGATGAGTGC 186477 ||||||| |||| || | ||| || | |||| | || | ||| | ||||| Sbjct 76547 AAATAGTTATGCATACTTA--AACAGTGAAAAATTATGGTTAACAA-ATTGGTTTAGTGC 76603 Query 186478 TATGAATGATCAAACAAACAGTCTGTTTCTACCAATAGGACCTGCTGATTTATTAGTTCA 186537 ||| ||| | || || ||| |||||||||||||| || | ||||| |||||||| Sbjct 76604 TATTAATAGTGGAAATAATTCTCTTTTTCTACCAATAGGTCCAGGAGATTTTTTAGTTCA 76663 Query 186538 TCATGCTATTGCACTTGGATTACATACTACAACTTTAATCCTAGTCAAGGGTGCATTAGA 186597 |||||| || || | || |||||| ||| |||||||| |||| || ||||| ||||| Sbjct 76664 TCATGCAATAGCTTTAGGTTTACATGTTACTACTTTAATTTTAGTAAAAGGTGCTTTAGA 76723 Query 186598 TGCTAGAGGTTCAAAACTCATACCAGATAAGAAAGATTTAGGATATTCATTCCCTTGTGA 186657 ||||||||| |||||||| || |||||||| |||||||| |||||| || || ||||| Sbjct 76724 TGCTAGAGGATCAAAACTAATGCCAGATAAAAAAGATTTTGGATATAGTTTTCCATGTGA 76783 Query 186658 TGGTCCAGGCAGAGGTGGTACTTGTGATAGTTCTGGTTGGGATGCTTTCTATCTCTCTGT 186717 |||||||| ||||| || || ||||||| ||| | |||||||||||| ||||| ||| Sbjct 76784 CGGTCCAGGAAGAGGAGGAACGTGTGATATTTCAGCTTGGGATGCTTTTTATCTTTCTAC 76843 Query 186718 GTTCTGGGCATTCAATACAATAGCATGGGCAGATTTTTATTGGCACTGGAAGAACCTT-- 186775 || ||| | |||||||||| ||| || ||||||||||| |||| ||| || Sbjct 76844 ATTTTGGATGCTAAATACAATAGGTTGGACAACATTTTATTGGCATTGGA--AACATTTA 76901 Query 186776 -GCTAGTTGGCAAGGTAATCAGGCACAATTCAATACATCAGGAACATATCTTATGGGTTG 186834 ||| ||| ||| ||| | ||||| || || | ||| ||||||| || Sbjct 76902 AGCT-TATGGTCAGGAAATTCTTCTCAATTTGATGAGTCTTCTAACTATATTATGGGATG 76960 Query 186835 GTTCAGAGATTATCTCTGGGCGAATAGTGCGCCTGTAATCACAGGGTACACACCATTTGG 186894 ||| ||||||||| | ||| ||| | || |||| | || || | | || || Sbjct 76961 GTTAAGAGATTATTTATGGCTAAATTCATCTCCATTAATTAATGGCTATAATTCCTTAGG 77020 Query 186895 TATGAATAATCTCTCTGTATGGGCATGGATGTTCTTGTTTGGTCATTTAGTTTGGGCAAC 186954 || ||| | | || |||||||||||||| || |||||||||||| |||||||||| Sbjct 77021 AATTAATTCTTTAGCTCCTTGGGCATGGATGTTTTTATTTGGTCATTTAATTTGGGCAAC 77080 Query 186955 AGGATTTATGTTCCTTATTTCTTGGAGAGGTTATTGGCAAGAGTTAATTGAGACTCTTGC 187014 ||||||||||||| | ||||| ||| | || ||||||||||| |||||||| || ||| Sbjct 77081 AGGATTTATGTTCTTAATTTCATGGCGTGGATATTGGCAAGAATTAATTGAAACAATTGT 77140 Query 187015 TTGGGCACATCAAAGAACTCCAATAGCAAATATAGCAGGTTGGAGAGATAAACCAGTGGC 187074 ||||| ||| ||||||||||| |||| ||| || | |||| |||||||||||| || Sbjct 77141 ATGGGCGCATGAAAGAACTCCATTAGCCAATTTAATTAGATGGAAAGATAAACCAGTAGC 77200 Query 187075 ACTTTCTATTGTTCAAGCAAGACTAGTTGG-TTTATCACATTTTGCCATAGGATTTGTGC 187133 | || || |||||||| ||| |||| || |||| |||||| | | || | | | Sbjct 77201 TTTATCCATAGTTCAAGCCAGATTAGTAGGCCTTAT-TCATTTTACAGTTGGCTATATAT 77259 Query 187134 TTACCTATGCACCATTCCTGATAGCAACAACAGCAAG 187170 |||| || |||||||| | || || |||| ||||| Sbjct 77260 TTACATACGCACCATTTGTAATTGCTTCAAC-GCAAG 77295 Score = 499 bits (552), Expect = 4e-136 Identities = 691/965 (72%), Gaps = 2/965 (0%) Strand=Plus/Plus Query 189692 AATAGAATCTATGTTGGTTGGTTTGGTGTACTCATGATTCC-ATGCTTGCTCGCAGCAGC 189750 || ||| | || |||| ||||| || || | |||||||| | |||| | |||| | Sbjct 40179 AACAGATTATACATTGGATGGTTCGGAGTTGTGATGATTCCTACGCTTT-TAACAGCTAC 40237 Query 189751 AGCATGCTTCGTTGTTGCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGA 189810 |||| ||| || | | ||||| ||||| || || |||||||||||||| || | || Sbjct 40238 TACATGTTTCATTATCGGTTTTATCGCAGCTCCTCCAGTAGACATTGATGGAATTCGCGA 40297 Query 189811 GCCAGTTGCAGGTTCACTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTC 189870 |||||| || || || || | ||||| |||||||| ||| | || | || | ||| Sbjct 40298 GCCAGTAGCTGGATCCCTATTATATGGAAACAACATTATTACAGGATCAATTATTCCTAG 40357 Query 189871 ATCAAATGCTATTGGTCTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTG 189930 ||||| || |||||| | || || || || || |||||||| || | | ||||| || Sbjct 40358 TTCAAACGCAATTGGTGTTCATTTTTATCCTATATGGGAAGCTGCTTCTATTGATGAATG 40417 Query 189931 GCTTTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGC 189990 | | || || |||||||| || || || || | || |||||| | | ||| | | Sbjct 40418 GTTATATAACGGTGGTCCATATCAACTGATAGTATTACACTTCTTAACAGGTGTAGCTTG 40477 Query 189991 ATACATGGGAAGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGT 190050 || | || | ||||||||||| | | |||| ||| | |||||||| | ||| Sbjct 40478 TTATTTAGGTCGTGAGTGGGAATTAAGCTTTCGCTTAGGAATGCGCCCTTGGATTTTTGT 40537 Query 190051 TGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCA 190110 ||| | ||| || |||||| |||||||| || |||||| | | || || | || || Sbjct 40538 TGCCTTTTCCGCTCCAGTAGCTGCAGCAACAGCTGTATTCTTAATTTATCCGATAGGACA 40597 Query 190111 GGGTTCATTCTCTGATGGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGT 190170 || || |||||||||||||||||||| || ||||| || || ||||||||||| || Sbjct 40598 AGGAAGTTTTTCTGATGGTATGCCTTTAGGGATTTCAGGGACTTTTAACTTCATGTTAGT 40657 Query 190171 ATTCCAAGCAGAACATAATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTAT 190230 |||||||| || ||||| || | ||||| ||||| || ||||| |||||||| || | Sbjct 40658 TTTCCAAGCCGAGCATAACATATTAATGCATCCATTTCACATGGCTGGTGTAGCTGGAGT 40717 Query 190231 GTTTGGTGGAGCATTATTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAG 190290 ||||| || ||||||| ||||||||||| || || | ||||| || || | || | Sbjct 40718 TTTTGGAGGTTCATTATTTTCTGCAATGCACGGATCTTTAGTAACTTCATCAATTATTCG 40777 Query 190291 AGAAACAACTGGTTTAGAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAAC 190350 ||||| ||| || |||| || ||||| ||||| |||||||||||||||||||| Sbjct 40778 TGAAACTTCTGAAAGCGAATCACCAAATTATGGATACAAATTTGGACAAGAAGAAGAAAC 40837 Query 190351 ATACAACATAGTAGCTGCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATT 190410 ||| || || || |||||||| || || || || ||| | || || || || || || Sbjct 40838 ATATAATATTGTTGCTGCTCACGGATATTTCGGAAGATTAATTTTTCAATACGCAAGTTT 40897 Query 190411 CAACAACTCAAGAAGTTTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTT 190470 || |||||| | ||||||||||||||||| | || || ||| | | ||||| Sbjct 40898 TAATAACTCACGTTCATTACACTTCTTCTTAGCTGCATGGCCAGTAGTTGGAATTTGGTT 40957 Query 190471 AACATCAATGGGTATTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTC 190530 ||| || | || ||| | |||||||| || |||||||| || || |||||||| || || Sbjct 40958 AACTGCATTAGGAATTAGTACAATGGCCTTTAACTTAAACGGATTTAACTTTAATCAATC 41017 Query 190531 TGTAGTTGATGCACAAGGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAA 190590 | ||||| ||||| | | | || || |||| ||| || | ||||||||||| Sbjct 41018 GATTATTGATAGCCAAGGAAGAGTAATTAACACTTGGGCAGATATTGTAAACAGAGCAAA 41077 Query 190591 CCTTGGTATGGAAGTAATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTTG 190650 ||||| || ||||||||||||||| | ||||| || ||||||||| |||| || |||| Sbjct 41078 TCTTGGAATCGAAGTAATGCATGAACGTAATGCTCATAACTTCCCATTAGATCTTGCTTT 41137 Query 190651 TGCTG 190655 | ||| Sbjct 41138 TTCTG 41142 Score = 493 bits (546), Expect = 2e-134 Identities = 726/1021 (71%), Gaps = 25/1021 (2%) Strand=Plus/Plus Query 190808 GATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGTCTTATATTATTA 190867 ||||||||| ||||| || ||||||||||| |||| ||||||||| | ||||||| Sbjct 28586 GATGACTGGCTAAAAAAAGACAGATTTGTATTTGTAGGATGGTCTGGTTTATTATTATTT 28645 Query 190868 CCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTTGTTACTAGTTGG 190927 || || || | || | | || || ||||| || |||| ||||||||||| |||| Sbjct 28646 CCGTGCGCGTATTTAGCTCTAGGAGGATGGTTTACTGGAATCACATTTGTTACCTCTTGG 28705 Query 190928 TATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTGACAGCAGCAGTA 190987 ||||| ||||| | || || | | ||||| || ||||| || || || || Sbjct 28706 TATACCCATGGCTTAGCTAGCTCCTTTTTAGAAGGTTGTAATTTTTTAACGGCTGCTGTT 28765 Query 190988 TCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGTCCAGAGGCACAA 191047 || ||||| | | || |||||| ||| |||| | | |||||||| ||||| || ||| Sbjct 28766 TCAACACCAGCTAATAGTATGGGACATTCTTTACTTCTTTTATGGGGACCAGAAGCGCAA 28825 Query 191048 GGTTCATTTGTTCGT-TGGTTACAAATTGGTGGACTTTGGAACTTTGTAGCACTTCATGG 191106 || |||| | || ||||| ||||||| || ||||||| ||||| || | || || Sbjct 28826 GGAA-ATTTTTCTGTATGGTTTAAAATTGGAGGTCTTTGGACATTTGTTGCCTTACACGG 28884 Query 191107 TGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGATTGGTGGGTAT 191166 | |||| || || ||||| ||||| || ||||||||||| |||| || || || Sbjct 28885 AGCTTTTGCACTAATTGGATTTTGCTTACGACAATTTGAAATTGCTCGATTAGTAGGAAT 28944 Query 191167 TAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTTCACAAGTGTATTCTT 191226 | |||||||||||||| | || ||||| || || || |||| || || || Sbjct 28945 TCGACCTTACAATGCTTTAGCATTTTCAGCACCGATCGCCATTTTTGTTTCCGTTTTTTT 29004 Query 191227 AATCTATCCACTTGGTCA-GCACAGTTGGTTCTTTGCACCTTCATTTGGAGTTGCAGCAA 191285 | | ||||| | || || ||| || ||||| |||||||| ||||| |||||||||| Sbjct 29005 ACTTTATCCTTTAGGGCAAGCA-AGCTGGTTTTTTGCACCAAGTTTTGGTGTTGCAGCAA 29063 Query 191286 TCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACTCAACCCTTTCCACA 191345 | ||| ||| | | |||||| | ||||| ||||| ||| ||| | || || ||||| | Sbjct 29064 TTTTTCGATTTTTACTATTCTTACAAGGATTCCATAATTGGACATTAAATCCATTCCATA 29123 Query 191346 TGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCATTCATGGTGCTACAG 191405 ||||||||||||| || | |||| | || ||||||||||| |||||||||||||| | Sbjct 29124 TGATGGGAGTTGCTGGAGTATTAGGAGCTGCGTTACTATGTGCAATTCATGGTGCTACTG 29183 Query 191406 TACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCAAGTTCAAAGTACAA 191465 | | || || | ||||| | || ||||| || |||| |||| Sbjct 29184 TTGAAAATACTCTTTATGAAG------------ATGGAGATG--CA---GCAAA-TACA- 29224 Query 191466 CCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTATGATCACTGCAAACA 191525 |||||||| ||| || || || || ||||| ||||| ||| | || || |||| Sbjct 29225 --TTTAGAGCCTTTACCCCTACTCAATCGGAAGAAACATATTCCATGGTTACAGCCAACA 29282 Query 191526 GATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATTTCTACACTTCTTGA 191585 |||| |||||||| || ||||| | || || || || ||||||| ||||||| || | Sbjct 29283 GATTTTGGTCACAAATTTTTGGAGTAGCTTTTTCCAATAAAAGATGGTTACACTTTTTTA 29342 Query 191586 TGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTATTGTAGGTCTTGCAC 191645 || | ||||||||||||| || | ||| || ||||||| |||||||| |||||| Sbjct 29343 TGCTATTTGTTCCTGTAACCGGTTTATGGGCAAGCGCAATAGGAATTGTAGGACTTGCAT 29402 Query 191646 TTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGT 191705 | |||||| | || ||||| ||| | || ||||| || ||||||||||||| || || | Sbjct 29403 TAAACTTACGCGCCTATGACTTTATTTCGCAAGAATTACGAGCAGCAGAAGATCCGGAAT 29462 Query 191706 TTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGATGTCTT 191765 | ||||| |||||||| || || ||| || | |||||||| || ||| ||||||| || Sbjct 29463 TCGAAACATTCTATACAAAAAATATTATTTTAAATGAAGGAATAAGATTATGGATGGCTG 29522 Query 191766 CAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTACCTAGAGGAAATG 191825 || |||||| || ||||| || | | | || ||||| || || |||| | ||||| | Sbjct 29523 CACAAGACCAGCCACATGAAAATTATATATTTCCAGAAGAGGTATTACCACGTGGAAACG 29582 Query 191826 C 191826 | Sbjct 29583 C 29583 Score = 165 bits (182), Expect = 1e-35 Identities = 182/237 (77%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 182498 GTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGGCTTGTCCATTGGAT 182557 || |||||||||||||| || ||||| || ||||||||||| | ||||||||| ||| Sbjct 19587 GTAAAAATATATGATACATGTATTGGTTGTACACAATGTGTAAGAGCTTGTCCAACAGAT 19646 Query 182558 GTATTAGAAATGGTTCCTTGGGATGG-GTGCAAAGCAAAGCAAATTGCTTCCTCACCTAG 182616 || |||||||||| || || ||| || ||| ||| |||||||| ||| |||| || Sbjct 19647 GTGTTAGAAATGG-TCGTTTGGACGGATTGCCGAGCTGGTCAAATTGCATCCGCACCCAG 19705 Query 182617 AACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTACAGACTTTTTAAG 182676 ||| || |||||||| ||||| ||| ||||||||| || || || ||||| |||||||| Sbjct 19706 AACAGAAGATTGTGTTGGATGCAAGCGATGTGAAAGTGCTTGCCCAACAGATTTTTTAAG 19765 Query 182677 TATTCGTGTTTA-CTTGGGTGCAGAAACCACAAGAAGCATGGGTCTAGCATATTAAG 182732 | | ||||| || ||||| | ||||| | ||||| ||||| || ||||||| Sbjct 19766 TGTACGTGTGTATCTTGGCAG-TGAAACAAGTAGAAGTATGGGCTTAAGTTATTAAG 19821 Score = 163 bits (180), Expect = 4e-35 Identities = 404/607 (67%), Gaps = 16/607 (3%) Strand=Plus/Plus Query 182809 TGAAAAGTGGGGGAAACCAGG--ATTCTTTGATAGGTCTTTAGCAAAAGGACCTAAAACA 182866 ||| || |||| ||||| || ||| ||| | || || | ||||||||||||| |||| Sbjct 72910 TGAGAAATGGGCAAAACCTGGTCATT-TTTCA-AGATCACTTGCAAAAGGACCTAGAACA 72967 Query 182867 ACCACATGGATATGGAATTTACACGCAGATGCTCATGATTTTGATAAGCATTCTAGTGAT 182926 || |||||||| |||||||||||||| |||| |||||||||||||| || | | | Sbjct 72968 ACTACATGGATTTGGAATTTACACGCCGATGTTCATGATTTTGATATTCAAACCAAATCT 73027 Query 182927 CTGCAAGAGAATTCAAGAAAAATATTTGCTGCACACTTTGCTCATCTAGGTATCATCTTT 182986 | |||| | || |||||||| ||| |||||| |||| || || || || ||| Sbjct 73028 TTAGAAGAAATATCTAGAAAAATTTTTAGTGCACATTTTGGACAACTTTCCATTATTTTT 73087 Query 182987 GTATGGATGAGCAGTTTCTTCTTTCAAGGTGCTAGGTTTTCAAACTATACAGGATGGTTG 183046 ||||||| || | | ||||| ||||| |||||||| ||||| ||| | Sbjct 73088 TTATGGATTAGTGGAATGCATTTTCATGGTGCATATTTTTCAAATTATACTTCTTGGCTT 73147 Query 183047 GCAGACCCAACTCATGTAAAACCTGGTGCTCAAGTGGTTTGGCCTATACTTGGTCAAGAG 183106 | |||| | || | || |||| |||| ||||||||| | | || ||||| Sbjct 73148 TTAAACCCTTTAAAAGTTCATCCAAGTGCCCAAGCTGTTTGGCCTGTTGTAGGACAAGAA 73207 Query 183107 ATATTGAATGGAGATCAGGGTGCAGGA---TATCAAGGTATTAGAATTACATCTGGTTTA 183163 || |||||||||||| | || |||| | ||| || | ||| || || || || Sbjct 73208 ATTTTGAATGGAGAT---GTTGGAGGAAATTTTCAGGGGTTACAAATAACTTCAGGATTT 73264 Query 183164 TTTCAGATGTGGAGAGC---ATGGGGTATAACAAATGAAACTCAACTAATGGCGCTAGCA 183220 ||| | || ||| |||| | | | || ||||| | || ||||| || | | Sbjct 73265 TTTGAAATTTGGCGAGCTGAAGGAGTTACAACAACTCAA---CAACTCTACGCAATTTCT 73321 Query 183221 CTAGGTGCTTTAGTTATGGCAGCAGTTATGTTTAATGCTGGTGCATTTCATTTTCACGTT 183280 |||| ||| | ||| | | | || ||||||| ||||| ||||| Sbjct 73322 ATAGGAAGCTTAATAATGTCTTTCTTAACTCTTTTTGCTGGTTGGTTTCACTTTCATAAA 73381 Query 183281 GCTGCTCCTAAGTTATCATGGTTTCAGAATGTAGAATCTATGATGAATCATCACCTTGCA 183340 | ||| || || ||| ||||||||| || | |||||| ||| | |||||||| | | Sbjct 73382 GTTGCACCAAAATTAGAATGGTTTCAAAACGCAGAATCCATGTTAAATCATCATTTATCT 73441 Query 183341 GGTTTGCTTGGTCTTGGTTCTTTAGGATGGGCAGGACATTTAATTCATATTTCAATCCCA 183400 || || || || | || ||| | ||||||||| ||| |||||||||| || ||| Sbjct 73442 GGGTTACTAGGCTTAGGATCTCTTTCATGGGCAGGTCATCAAATTCATATTGGAAATCCA 73501 Query 183401 ACTAATA 183407 | |||| Sbjct 73502 ATAAATA 73508 Score = 93.3 bits (102), Expect = 5e-14 Identities = 124/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 190492 AATGGCATTC-AACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAAGGTA 190550 |||||| || |||||||| || || |||||||| || || | ||||| ||||| | Sbjct 112357 AATGGCCTTTTAACTTAAACGGATTTAACTTTAATCAATCGATTATTGATAGCCAAGGAA 112298 Query 190551 AAATTGTTCCAACATGGGGC-GATGT-TCTTAACAGAGCAAACCTTGGTATGGAAGTAAT 190608 | | || || |||| | ||| | | | ||||||||||| ||||| || |||||||| Sbjct 112297 GAGTAATTAACACTTGGGCCAGATATATGTAAACAGAGCAAATCTTGGAATCGAAGTAAT 112238 Query 190609 GCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCTTGTGCTG 190655 ||||||| | ||||| || ||||| ||| |||| || |||| | ||| Sbjct 112237 GCATGAACGTAATGCTCATAACTT-CCATTAGATCTTGCTTTTTCTG 112192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 183596 ACCTTTAAAGGTGGTTTGAATCCTGTAACTGGCAGTCTTT--GGATGACAGATATAGCAC 183653 |||||||| || ||||| | || |||| || ||||| || | | |||||||| | Sbjct 75870 ACCTTTAATGGAGGTTTTCACCCACAAACT--CAATCTTTATGGTTATCTGATATAGCGC 75927 Query 183654 ATCATCACCTAGCAATAGCAGTTATGTTTATCATTGCAGGTCATATGTATCGCACAAACT 183713 | ||||| |||| || | ||| | |||||||||||||||||||||||| | ||||| | Sbjct 75928 ACCATCATTTAGCTATTGGTGTTTTATTTATCATTGCAGGTCATATGTATAGAACAAATT 75987 Query 183714 GGGGTATTGGTCAATCAATGAAAGAGATATTAGA 183747 ||||| ||||| | ||||| || ||||| Sbjct 75988 TTGGTATAGGTCATAGTTTTAAAGAAATTTTAGA 76021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631410112001400