Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq1525 95.1 1e-14 >seq1525 Length=339361 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 126081 TGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCA 126140 |||||||| ||||| || | ||| || | ||||||||||| ||| | || ||| Sbjct 147638 TGATTGGAGTAAATGTGGGTATCACCCATACAGTGAATGAATTCTCCCGGTTGTAGACCA 147579 Query 126141 CATTCTTTTGCAA-CAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACC 126199 | | |||| || ||| |||||||| | |||| |||||||||||||| || || Sbjct 147578 GTGACATGAGCAATCATGATC-GTCAGTAACGAATAAGAAGCAATATTGAAAGGCACCCC 147520 Query 126200 TAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTA 126259 ||| |||||| |||||| || || | || ||||| || ||||| || || Sbjct 147519 TAAGCCGATATCACAACTTCTCTGGTACATCAAGCACGACAATTTCCCGTCTTGAACATA 147460 Query 126260 AAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCA 126319 ||||||| | | |||||||||| || || ||||| ||| | |||| |||||||| Sbjct 147459 AAATTGACAAAACATGTGGCAAGGAGGCAACGCCATCAAATTCAAATCAGCCGGATTCCA 147400 Query 126320 TGCTGA 126325 || || Sbjct 147399 AGCGGA 147394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408587618748155