Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1775 167 6e-36 seq1422 167 6e-36 seq1355 141 2e-28 seq1110 132 1e-25 seq249 129 1e-24 seq81 127 5e-24 seq1346 111 4e-19 seq100 107 5e-18 seq1467 102 2e-16 seq1377 98.7 2e-15 seq1490 93.3 1e-13 seq2056 89.7 1e-12 >seq1775 Length=332822 Score = 167 bits (184), Expect = 6e-36 Identities = 172/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || ||||| || || |||||||| || | |||||| || |||||||| Sbjct 274993 ACGCAGACGCAACACGAGGTGCAGCGTCGATTCTTTCTGAATATTGTAGTCTGCCAAAGT 274934 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||| ||||| || || || |||||||| ||||| || Sbjct 274933 CCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGTGGAATCCC 274874 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || || || || || ||| || ||| | || |||| |||||||| | Sbjct 274873 TTCCTTGTCCTGAATTTTCTGTTTGACATTGTCAATGCTATCCGAGGGCTCCACGTCCAG 274814 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||| || ||||||||||||| || || | ||| | |||||||| Sbjct 274813 CGTAATGGTCTTGCCCGTCAGGGTCTTGACGAAAATCTGCATTTT 274769 >seq1422 Length=277306 Score = 167 bits (184), Expect = 6e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || || | |||||| || |||||||| | || || Sbjct 271534 AGTACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCAGCCAAAGTACGACCGTCC 271475 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || || || || ||||| ||||||||||| Sbjct 271474 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGTGGAATGCCTTCCTTGTCC 271415 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||||||||| ||| ||||| | || |||| |||||||| | ||| |||||| Sbjct 271414 TGGATCTTTTGCTTTACATTGTCGATCGAATCCGAGGGCTCCACGTCCAGCGTAATCGTC 271355 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| |||| || | |||||| Sbjct 271354 TTACCAGTCAAAGTCTTTACAAAAATTTGCAT 271323 Score = 154 bits (170), Expect = 4e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || | || || || | |||||| || |||||||| | || || Sbjct 271306 AGCACCAGGTGGAGCGTACACTCCTTCTGTATATTGTAGTCAGCCAAAGTACGACCGTCC 271247 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || || || || || || || ||||| ||||||||||| Sbjct 271246 TCGAGCTGCTTGCCGGCAAATATCAGACGCTGCTGATCAGGTGGAATTCCTTCCTTGTCC 271187 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||||||||| || ||||| | ||| || | ||||||||| || ||||||||| Sbjct 271186 TGGATCTTTTGCTTTACGTTATCGATCGAGTCCGAAGGTTCCACGTCCAAAGTGATCGTC 271127 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || |||| ||| || | ||| | ||||||| Sbjct 271126 TTACCAGTCAGAGTCTTGACGAAAATTTGCATT 271094 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| ||||| ||||| || || || || || || ||||| |||||| Sbjct 271708 CCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGTGGAATGCCTTCC 271649 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGAT 225647 ||||| |||||||||||||| ||| ||||| Sbjct 271648 TTGTCCTGGATCTTTTGCTTTACATTGTCGAT 271617 >seq1355 Length=184863 Score = 141 bits (156), Expect = 2e-28 Identities = 166/223 (74%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTT-TGGACATTGTAATCGGCCAAAG 225550 ||| || | || |||||||| || || || || ||| |||| ||||| ||| ||||| Sbjct 90889 ACGCAGACGCAACACAAGGTGAAGGGTCGACTCCTTTCTGGATGTTGTAGTCGCTCAAAG 90948 Query 225551 TTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 | | || || || | |||||| ||||| || || || ||||| ||||| || ||||| | Sbjct 90949 TACGGCCGTCCTCCAACTGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTC 91008 Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 |||||||||| || ||||| |||||||| ||||| | ||| || | || ||||| | Sbjct 91009 CTTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCGGAAGGCTCAACGTCAA 91068 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| ||||||||||| || | ||| | ||||| Sbjct 91069 GAGTGATTGTCTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 91111 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||||| || || || || || |||| ||||| ||| || ||| Sbjct 90661 ACGCAGACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGT 90720 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || | |||||| ||||| || || || ||||| ||||| || ||||| || Sbjct 90721 ACGGCCGTCCTCCAACTGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTCC 90780 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| || ||||| |||||||| ||||| | ||| || | || ||||| | Sbjct 90781 TTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCGGAAGGCTCAACGTCAAG 90840 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| ||||||||||| || | ||| | ||||| Sbjct 90841 AGTGATTGTCTTTCCCGTCAAAGTCTTGACGAAAATCTGCAT 90882 Score = 138 bits (152), Expect = 3e-27 Identities = 168/228 (74%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||||| || || || || || |||| ||||| ||| |||||| Sbjct 91118 ACGCAGACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAAGT 91177 Query 225552 T-CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 | | || || || | |||||| ||||| || || || ||||| ||||| || ||||| | Sbjct 91178 TACGGCCGTCCTCCAACTGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTC 91237 Query 225611 CTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 |||||||||| || ||||| |||||||| ||||| | ||| || | || ||||| | Sbjct 91238 CTTCCTTGTCCTGAATCTTCTGCTTCACGTTATCGATCGAGTCAGATGGCTCTACGTCGA 91297 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTAT 225718 ||||| ||||| ||||||| || |||| || | |||||| ||| Sbjct 91298 GAGTGATTGTCTTTCCCGTCAGCGTCTTTACAAAAATCTGCATTGTAT 91345 Score = 120 bits (132), Expect = 7e-22 Identities = 154/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||||| ||||| || ||||| |||| ||||| ||| || ||| Sbjct 90433 ACGCAGGCGCAACACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGAGT 90492 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || | |||||| ||||| || || || ||||| ||||| || ||||| || Sbjct 90493 ACGGCCGTCCTCCAACTGCTTGCCAGCAAAAATTAGACGTTGCTGGTCAGGTGGAATTCC 90552 Query 225612 TTCCTTGTCTTGGA--TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCT 225669 ||||||||| | | |||| |||||||| ||||| | ||| || | || ||||| Sbjct 90553 TTCCTTGTCCTAAATTTCTTCTGCTTCAC-TTGTCGATCGAGTCGGAAG-CTCAACGTCA 90610 Query 225670 AACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 | || || ||||| ||||||||||| || Sbjct 90611 AGAGTAATAGTCTTTCCCGTCAAAGTCTT 90639 >seq1110 Length=486086 Score = 132 bits (146), Expect = 1e-25 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| || ||||| ||||| ||||| | || || ||||| |||||||| |||||| Sbjct 256260 CCATCTTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGCGGAATGCCTTCC 256201 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| ||||| || ||||| ||| || ||| ||||||| | ||||||||| | ||| Sbjct 256200 TTGTCCTGGATTTTCTGCTTTACATTGTCAATGCTGTCTGACGGTTCCACGTCCAGCGTA 256141 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || |||||||||||||| || || Sbjct 256140 ATGGTCTTGCCCGTCAACGTCTT 256118 >seq249 Length=9932 Score = 129 bits (142), Expect = 1e-24 Identities = 203/284 (71%), Gaps = 10/284 (4%) Strand=Plus/Plus Query 7444 TTATATTTAATATTTGGTGGCTTTT--CTGGTATTATAGGTACTATATTTTCTATGATTA 7501 |||||||||||||| | || || | ||| | | ||||||||| || |||||| | | Sbjct 5043 TTATATTTAATATTCG--GGTTTATAGCTGCTTTAATAGGTACTTCTTTCTCTATGTTAA 5100 Query 7502 TAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGA--GTGGT-AATA--GCCAAC 7555 |||| |||||||||||| ||| ||| ||| |||| | || | |||| | ||| Sbjct 5101 TAAGATTAGAATTAGCTAGTCCTGGTATACAATATATAAACTCTGATAAATACGGTCAAA 5160 Query 7556 TTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGG 7615 | ||||| ||| | || || || ||||| | ||||||| ||||| ||||| ||||| | Sbjct 5161 TATACAATGTTTTAATAACAGCTCATGCTGTATTTATGATATTCTTATTTGTAATGCCTG 5220 Query 7616 TTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGG 7675 | | ||||| | |||||| |||| || || ||| | | || || ||||| || |||| Sbjct 5221 TACTTATAGGGGCTTTCGGTAATTACTTTGTACCTATCTTAATAGGGGCTCCAGACATGG 5280 Query 7676 CTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719 | || || || | || |||||| ||| || ||| |||| ||| Sbjct 5281 CATTCCCTAGATTAAATAATATATCTTTCTGGTTATTACCTCCT 5324 Score = 89.7 bits (98), Expect = 1e-12 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 ||||| | ||||||||||| || ||| || ||||||| || ||||| |||| ||||| Sbjct 6751 AATGGCATTTTATGCATAGCTAGACCTGGGGCTCTCATGTTTAATATAGTAGCTATAAAA 6692 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 |||||||| |||| |||||| ||| ||| | |||||| ||| || |||||||| Sbjct 6691 TTTATAGCTCCTAAAAGAGAGCTTATTCCTAATATGTGTAAAGCAAAGATAGCTAAATCC 6632 Query 371485 AC 371486 || Sbjct 6631 AC 6630 >seq81 Length=49885 Score = 127 bits (140), Expect = 5e-24 Identities = 105/127 (83%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATA-CAATCT 7794 |||||||||| ||||| | |||||||||||||||||| ||||||||||| || | | Sbjct 45189 TGGTAAGATTTCTTGCGATTTATCAAATTAAACCACATGCTCCACCGCTTGTAACTAGTC 45248 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTACGC 7854 ||||||||||||||| |||| || |||||| || |||| | ||||||| || |||| || Sbjct 45249 TCCGTCAGTTTCTTTAGGTTTCAATCTTGCGATCATAGTTCCCAGGTGGGATGTTTATGC 45308 Query 7855 GTTAGCT 7861 ||||||| Sbjct 45309 GTTAGCT 45315 Score = 100 bits (110), Expect = 7e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||| ||||| |||||||| || ||||||||||| ||||| | ||| || || | Sbjct 11302 ATACTTCTGGATGTCCAAAAAACCAAAATAAATGTTGGTAAAGTACTAAATCTCCACCTC 11361 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCA 370765 ||||||||||| | || ||||||||||||||||||||| Sbjct 11362 CTGATGGATCATAGAAACTAGTATTAAAATTTCTATCA 11399 Score = 89.7 bits (98), Expect = 1e-12 Identities = 196/287 (68%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 7446 ATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATAAG 7505 ||||||| | ||||| ||| |||| || | | || | |||| |||||| |||| | Sbjct 11982 ATATTTATT--TTGGTATATTTAATGGTTTTCTTGCTATTTTATTATCTATGGTTATGCG 11925 Query 7506 GTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGT-AATAGCCAACTTTACAACG 7564 ||||||||| | ||| || |||| |||| ||| |||| |||| |||| || Sbjct 11924 ATTAGAATTAACATTTCCAGGAGATCAAGTATTATTTGGGGAATA-CCAATTTTATAATA 11866 Query 7565 TTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTT-GTTATGCCGGTTATGATA 7623 | |||| ||| ||| | || | ||| || ||| | | |||||||| || | | Sbjct 11865 TGATTACTACAATGCACGGTATTTTAATG-TTGTCTGTAGTAGTTATGCCTATTTTATTT 11807 Query 7624 GGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCA 7683 || || || || |||| || | |||| || | || || || ||||||||||| |||||| Sbjct 11806 GGTGGATTTGGTAATTATTTTGCTCCTATATTAATAGGGGCACCTGATATGGCATTTCCA 11747 Query 7684 AGGCTTAACAATATAAGTTTTTG---ATTACTACCGCCTTCCTTATT 7727 || | || ||| | |||||||| |||| ||| || | ||||| Sbjct 11746 AGATTAAATAATTTTAGTTTTTGGATGTTACCACCATCTACATTATT 11700 >seq1346 Length=39314 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || |||||| ||||||| | | |||||| ||||||||||||| || ||||||||||| Sbjct 12250 AAAGGTAATCTATGCATTAACATACCAGGCGCTCTCATATTAAAAATAGTAGTAATAAAA 12309 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 ||||||| |||| || ||||| | || | | |||||| || || || |||||||| Sbjct 12310 TTTATAGAACCTAAAATAGAAGCTGCTCCAGATAAATGTAAGCTGAAGATAGCTAAATCA 12369 Query 371485 ACGGAACCGCCGGAGTGAGCTACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCGGT 371543 | ||| || || |||||| |||| | ||| || || ||||| || || ||||| Sbjct 12370 ATAGAAGGTCCTGAATGAGCTTGAATACTAGATAAAGGAGGATAAACAGTCCATCCGGT 12428 Score = 111 bits (122), Expect = 4e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | || || ||| || | || | ||||| ||| | ||||||||||| | |||||| Sbjct 12644 CAATTATATAATGTTCTTGTAACAGGACATGCTTTTTTAATGATTTTCTTCATGGTTATG 12585 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || | | || || || || ||||| | || ||||| |||||||| || || |||||| Sbjct 12584 CCTATATTAATTGGAGGATTTGGAAACTTTTTTGTTCCATTAATGATAGGAGCCCCTGAT 12525 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 ||||| || |||||||| || ||||| || || ||| |||| ||||| ||||| Sbjct 12524 ATGGCGTTCCCAAGGCTAAATAATATTTCATTCTGGTTATTACCACCTTCTTTATT 12469 Score = 96.9 bits (106), Expect = 8e-15 Identities = 99/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 |||||||||| |||| |||| ||||||||||||||||||||| ||| || | Sbjct 6420 TGGTAAGATTTCGCGCGTGTTATCGAATTAAACCACATACTCCACCACTTGTATGACTCC 6361 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-ACGC 7854 |||||| || ||||||||| || ||| ||||| | | |||| ||||||||| |||| Sbjct 6360 CCGTCAATTCCTTTGAGTTCCAATGTTGACATCGTACTTCCCAGGCGGAATATTTAACGC 6301 Query 7855 GTTAGCTT 7862 |||||||| Sbjct 6300 GTTAGCTT 6293 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/104 (79%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| ||||| |||||||| ||||||||||||||||| || || || || ||||| || | Sbjct 12072 TTCTGGATGTCCAAAAAACCAGAATAAATGTTGATATAGTATTGGGTCTCCTCCTCCACA 12131 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 || ||||| || | ||||| || ||||| || ||||| |||| Sbjct 12132 AGGGTCAAAGAAAGTTGTATTGAAGTTTCTGTCTGTTAATAACA 12175 >seq100 Length=112360 Score = 107 bits (118), Expect = 5e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || |||||||| |||||||| ||||| |||||||| || |||||||||||||||||||| Sbjct 42247 AAAATTTGACCGTCAGTAATTGAGATTACATTTGTTGGAATATAAGCAGAAACATCACCA 42306 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATTT 4587 |||| |||||| |||| ||||| || || | |||||||| || ||| |||| Sbjct 42307 GCTTCTGTTTCTACAATTGGTAAAGCAGTCATACTACCACCACCTAATTTTGCATTT 42363 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| | ||| ||| ||||||||||||| ||||||||||| | | | Sbjct 27250 TGGTAAGGTTCTTCGTGTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 27309 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| | || | | |||| || ||| || |||| Sbjct 27310 CCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCATACTTCCCAGGCGGGATACTTAACGC 27369 Query 7855 GTTAGCT 7861 |||| || Sbjct 27370 GTTAACT 27376 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/105 (81%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 6767 TTGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCA 6824 ||||||| ||||||||||||| ||| ||||| | |||| ||| | || ||| | |||| Sbjct 27913 TTGAGAGGATGATCAGCCACACTGGAACTGAGACACGGTCCA-GACTCCTACGGGAGGCA 27855 Query 6825 GCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAAT 6869 |||||| |||| || ||||||| |||||||||||||| || ||| Sbjct 27854 GCAGTGAGGAATTTTGGACAATGAGCGAAAGCTTGATCCAGCAAT 27810 >seq1467 Length=59618 Score = 102 bits (112), Expect = 2e-16 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 372622 TAGGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTT 372681 ||||||| ||| ||||| |||| ||||||||||| ||||||| ||||||| ||||| | Sbjct 46593 TAGGTGTCACAAAATAGGGGGTTGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATG 46534 Query 372682 GTAAAACGATGTATAGGGTCTGACAC 372707 |||| | ||||||||||||||||||| Sbjct 46533 GTAACATGATGTATAGGGTCTGACAC 46508 >seq1377 Length=62577 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| | ||||| ||| || ||||||| ||||||||| | ||| | || ||||| |||||| Sbjct 27129 CAATTATACAATGTTGTTGTTACGGCACATGCCTTTATAATGGTATTTTTTTTAGTTATG 27070 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTG 7660 || | | || || ||||| || ||||| ||||||||||||||||||| Sbjct 27069 CCTGCCTTAATTGGAGGTTTTGGTAATTGGTTCGTTCCTTTAATGATTG 27021 >seq1490 Length=214893 Score = 93.3 bits (102), Expect = 1e-13 Identities = 97/126 (77%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| || || ||||| ||| |||||| ||||||| |||||||||| | | | | Sbjct 75556 GGTAAGGTTTTTCGCGTTGCATCGAATTAATCCACATAATCCACCGCTTGTGCGGGCCCC 75497 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGCG 7855 ||||| || |||||||||||| |||||| |||| | | |||| || || || ||||| Sbjct 75496 CGTCAATTCATTTGAGTTTTAATCTTGCGACCGTACTCCCCAGGCGGTCTACTTCACGCG 75437 Query 7856 TTAGCT 7861 |||||| Sbjct 75436 TTAGCT 75431 >seq2056 Length=237508 Score = 89.7 bits (98), Expect = 1e-12 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 7649 CTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGAT 7708 |||||||||||||||||||||||||||| ||||| | | || |||||||||||||| | Sbjct 41467 CTTTAATGATTGGTGCTCCTGATATGGCCTTTCCTCGTATGAATAATATAAGTTTTTGGT 41408 Query 7709 TACTACCGCCTTCCTTATT 7727 |||| || ||| | ||||| Sbjct 41407 TACTTCCCCCTGCTTTATT 41389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192498120302510