Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq1612 84.2 1e-11 >seq1612 Length=217819 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 47492 CACGTCGCCCTGATGCCGGATGCACACGGCGGCAAAGGATCTGCCGTTGGCACGGTGATT 47551 ||| ||||| |||||| |||| |||| |||| || | | || || ||||||| Sbjct 127079 CACATCGCCGCGATGCCCGATGTCCACGTGGGCATCGGCGCAACGGTGGGGTCGGTGATC 127138 Query 47552 CCCACCGTGGATGCCGTGATCCCGGCCGCGGTCGGCGTGGACATCGGCTGCGGCATGAT 47610 || || || | || | ||||||||||||||||| ||||||||||||||||| ||||| Sbjct 127139 CCGACGCTGAAGGCAATCATCCCGGCCGCGGTCGGGGTGGACATCGGCTGCGGGATGAT 127197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297912139101500