Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq1501 187 8e-43 >seq1501 Length=377221 Score = 187 bits (206), Expect = 8e-43 Identities = 179/226 (79%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGGT---GTCCG- 34042 |||||| || ||||| |||||||| | ||| |||||||| | | || | |||| Sbjct 328503 GCCGTTCCGCTGCTTGGCGATGATGATCTCCGCCACGCCCGGCTCCTTGCACTCGTCCTT 328562 Query 34043 GGTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCC 34102 |||| ||| |||||| ||||| | ||||||||| | ||| |||||||||||||| || | Sbjct 328563 GGTG-TAGTACTCGTCGCGGTAGATGAACATGATGATGTCCGCGTCCTGCTCGATGGCGC 328621 Query 34103 CGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGT 34162 | |||||||||||||| ||||||||||| ||||||| ||||||| |||| ||||||| Sbjct 328622 CCGACTCGCGCAGGTCGGACATCATCGGACGCTTGTCCGGCCGCGTTTCCACCGAGCGGT 328681 Query 34163 TGAGCTGCGACAGCACGATCACGGGGATACCAAGCTCCATGGCCAG 34208 | |||||||||||| ||||||| ||| | |||||| ||||||| Sbjct 328682 TCAGCTGCGACAGCGCGATCACCGGGCAGCGCAGCTCCTTGGCCAG 328727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160459874570850