Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq1390 82.4 8e-11 >seq1390 Length=268060 Score = 82.4 bits (90), Expect = 8e-11 Identities = 107/146 (73%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 120467 GGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 120526 || |||||||| ||||| | || |||||||||||| | ||||| || |||||| Sbjct 43892 GGCCCGGGCCGGGGATCGGGCGCGGGCTCGCTGGTCGCGTACGTGCTGCTGATCACCGAC 43833 Query 120527 ATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATC--GCCCCG 120584 | || ||| | ||||| ||||| |||||||||| ||| | |||||||| | | || Sbjct 43832 CTGGACCCGCTGCAGTACAACCTGCTGTTCGAGCGTTTCCTGAACCCGGAGCGGGTGTCG 43773 Query 120585 ACTTTCCCGACATCGACGTCGACTTC 120610 | | || ||| ||||| |||||||| Sbjct 43772 A--TGCCTGACTTCGACATCGACTTC 43749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515010062163000