Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1382 116 3e-21 >seq1382 Length=24816 Score = 116 bits (128), Expect = 3e-21 Identities = 316/474 (67%), Gaps = 20/474 (4%) Strand=Plus/Plus Query 18624 TTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGTTTATCCGC 18683 ||||| ||||| | || |||||||| | || | || || || ||||||||||| Sbjct 14758 TTAACAACAAAAAGAGTATTTTGGAGAGGAGTTGCTGAGGAATTATTATGGTTTATTAAT 14817 Query 18684 GGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATATATACGGA 18743 || || || |||| | ||||| | || | || || || |||||| | || Sbjct 14818 GGTGATACAAATGCCAATCATCTCGCAGAAAAGAACATTCATATTTGGGATGGCAATGGT 14877 Query 18744 TCGAGCAAATTTCTAAATAGGAAT--GGCTTCCATAAAAGACACACGGGGGACCTTGGCC 18801 || || |||| || ||| ||| || || | | ||| | ||| || | || | Sbjct 14878 TCAAGAGAATTCCTTGATA--AATTAGGTTTAAAGGATAGAGAAGTGGGTGATTTAGGTC 14935 Query 18802 CCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACT 18861 | |||| || || || ||| | |||||||| || ||||||||||||| ||||| ||| Sbjct 14936 CAGTTTATGGATTTCAATGGCGTCATTTTGGTGCTGAATATAAAGACT-TCAAT---ACT 14991 Query 18862 -ATT-TAC--AGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAAC 18917 ||| ||| | ||||| | || || || | || ||||| |||||||||| || Sbjct 14992 GATTATACTAATAAAGGAGTTGACCAATTGAAGGAAGTAATAGAAACAATTAAAAACAAT 15051 Query 18918 CCAGAAAGCCGA-CGAATGATTATATCGTC---TTGGAATCCAAAGGATATCCCCTTAAT 18973 ||| | || || | ||||||| | | ||||||||| | | ||| || ||| Sbjct 15052 CCAA----CGGATCGTAGAATTATATTGACAGCTTGGAATCCTAGTGCTATTCCTAAAAT 15107 Query 18974 GGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCTG 19033 || | ||||||| ||||| | | | ||||||||||| || || ||||| ||||| || Sbjct 15108 GGCATTACCTCCTTGTCATATGATGTGTCAGTTTTATGTAAGTAATGGTGAGTTATCATG 15167 Query 19034 CCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGC 19087 ||| | || || ||||| | |||||||| | || || || || || || || Sbjct 15168 TCAAATGTATCAAAGATCATGCGATATGGGATTAGGCGTTCCATTTAATATAGC 15221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399496949753160