Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1382 217 1e-51 seq182 98.7 7e-16 >seq1382 Length=24816 Score = 217 bits (240), Expect = 1e-51 Identities = 423/618 (68%), Gaps = 10/618 (2%) Strand=Plus/Minus Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066 |||||||||| ||| ||| | | | || ||| | | | |||||||| || || Sbjct 15370 TTGGGAAAGGATAAGGATTTCTCTTTAATTGTTCTTTCAATGGTTCAATGTGGTTATTAT 15311 Query 97067 AAATGTGAGCATCTCC--TAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATG 97124 ||| |||| ||| || ||| ||| | ||| || || || ||| |||| ||||| Sbjct 15310 AAACATGAGTATCACCAGTAACATGT--ACAAACTCACCTGGTTTTAACCCAGTAACATG 15253 Query 97125 GGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCAT 97184 ||||| | | ||| |||| || || || || ||||| || || |||| |||||| Sbjct 15252 AGCGATTAAAATAGTCAATAATGAGTAAGATGCTATATTAAATGGAACGCCTAATCCCAT 15193 Query 97185 ATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACT 97244 ||| |||||||||||| | ||||| || | || |||| || ||||||||||||| Sbjct 15192 ATCGCATGATCTTTGATACATTTGACATGATAACTCACCATTACTTACATAAAACTGACA 15133 Query 97245 CAATACATGACAGGGGGGCAACGCCATTTTTGGAACA--TCTAAGACATTCCAAGCACAC 97302 || | |||||| || || || |||||||| |||| | ||| | ||||||||| | Sbjct 15132 CATCATATGACAAGGAGGTAATGCCATTTTAGGAATAGCACTAGG--ATTCCAAGCTGTC 15075 Query 97303 ATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGA 97362 | | ||||| | ||| ||||| || | | || || | |||| | ||| ||||| Sbjct 15074 AATATAATTCTACGATCCGTTGGATTGTTTTTAATTGTTTCTATTACTTCCTTCAATTGG 15015 Query 97363 TCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421 ||||| |||| | ||||| || | ||| ||| |||||| || |||||||| | Sbjct 15014 TCAACTCCTTTATTAGTATAATCAGTATTGAAG-TCTTTATATTCAGCACCAAAATGACG 14956 Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTT 97481 |||||| ||||||||||| || || | || || |||||||||| ||||| | || Sbjct 14955 CCATTGAAATCCATAAACTGGACCTAAATCACCCACTTCTCTATCCTTTAAACCTAATTT 14896 Query 97482 ATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTC 97541 ||| | | || || ||||| |||||||||| || | | |||| || | Sbjct 14895 ATCAAGGAATTCTCTTGAACCATTGCCATCCCAAATATGAATGTTCTTTTCTGCGAGATG 14836 Query 97542 TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAA 97601 ||| | ||| || | |||||||| || ||||| || |||| ||||||||||| Sbjct 14835 ATTGGCATTTGTATCACCATTAATAAACCATAATAATTCCTCAGCAACTCCTCTCCAAAA 14776 Query 97602 TACTCTCTTAGTTGTTAA 97619 |||||| || |||||||| Sbjct 14775 TACTCTTTTTGTTGTTAA 14758 >seq182 Length=52265 Score = 98.7 bits (108), Expect = 7e-16 Identities = 174/252 (69%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 97007 TTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACAT 97066 |||||||||| ||| ||| | | | || ||| | | | |||||||| || || Sbjct 251 TTGGGAAAGGATAAGGATTTCTCTTTAATTGTTCTTTCAATGGTTCAATGTGGTTATTAT 192 Query 97067 AAATGTGAGCATCTCC--TAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATG 97124 ||| |||| ||| || ||| ||| | ||| || || || ||| |||| ||||| Sbjct 191 AAACATGAGTATCACCAGTAACATGT--ACAAACTCACCTGGTTTTAACCCAGTAACATG 134 Query 97125 GGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCAT 97184 ||||| | | ||| |||| || || || || ||||| || || |||| |||||| Sbjct 133 AGCGATTAAAATAGTCAATAATGAGTAAGATGCTATATTAAATGGAACGCCTAATCCCAT 74 Query 97185 ATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACT 97244 ||| |||||||||||| | ||||| || | || |||| || ||||||||||||| Sbjct 73 ATCGCATGATCTTTGATACATTTGACATGATAACTCACCATTACTTACATAAAACTGACA 14 Query 97245 CAATACATGACA 97256 || | |||||| Sbjct 13 CATCATATGACA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346777880129360