Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq181 86.0 7e-12 >seq181 Length=610132 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| ||||| || | ||||| ||||| || || || || ||||| ||||||||| Sbjct 522761 TCCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACT 522702 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| | | || |||| |||||||||||||| || | || || || || | || Sbjct 522701 GAGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGG 522642 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 43133 | | || ||| | ||| |||| | |||| ||| | | | || || || | ||| Sbjct 522641 AATAC-CTTCTTTATCTTGAATTTTGGCCTTGA-CGTTGTCAATAGTATCACTTGGTTCA 522584 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| | || || |||||||| || || || || |||||||||||||| Sbjct 522583 ACATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCAT 522534 Score = 84.2 bits (92), Expect = 3e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | ||||| ||||| || || || || ||||| ||||||||| Sbjct 522532 CCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACTG 522473 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | | || |||| |||||||||||||| || | || || || || | || Sbjct 522472 AGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGA 522413 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | || ||| | ||| |||| | |||| ||| | | | || || || | ||| | Sbjct 522412 ATAC-CTTCTTTATCTTGAATTTTGGCCTTGA-CGTTGTCAATAGTATCACTTGGTTCAA 522355 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| | || || |||||||| || || || || |||||||||||||| Sbjct 522354 CATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCAT 522306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571807250101440