Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq181 141 1e-28 seq1421 136 6e-27 seq207 116 6e-21 seq453 102 1e-16 >seq181 Length=610132 Score = 141 bits (156), Expect = 1e-28 Identities = 114/138 (83%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 ||||||||| | |||||| || |||||||||||||||||||| || || ||||| Sbjct 522761 TCCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACT 522702 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 |||||||| | ||| |||||||| || ||||| || ||||||||||| ||||| ||||| Sbjct 522701 GAGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGG 522642 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| |||||||||||||| Sbjct 522641 AATACCTTCTTTATCTTG 522624 Score = 140 bits (154), Expect = 5e-28 Identities = 113/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || |||||||||||||||||||| || || ||||| Sbjct 522532 CCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACTG 522473 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| |||||||| || ||||| || ||||||||||| ||||| |||||| Sbjct 522472 AGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGA 522413 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 522412 ATACCTTCTTTATCTTG 522396 >seq1421 Length=125447 Score = 136 bits (150), Expect = 6e-27 Identities = 113/138 (82%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 ||||||||| | |||||| || ||||| | || |||||||| || || ||||| || Sbjct 52324 TCCACCTCTTAATCTTAAGACTAAATGAAGTGTGGATTCTTTTTGGATGTTGTAATCAGA 52265 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||||| ||| ||||||||||| |||||||||||||||||||| ||||| || || Sbjct 52264 TAATGTTCTGCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 52205 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| |||||||||||||| Sbjct 52204 AATACCTTCTTTATCTTG 52187 >seq207 Length=264058 Score = 116 bits (128), Expect = 6e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| | ||| ||||| || || | || |||||||| ||||| ||||| || Sbjct 251346 CCGCCTCTTAATCTCAATACTAAGTGAAGTGTTGATTCTTTTTGGATATTGTAATCAGAT 251405 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| ||||||||||| || || |||||||||||||| ||||| || ||| Sbjct 251406 AATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCTGGTGGA 251465 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 251466 ATACCTTCTTTATCTTG 251482 >seq453 Length=342662 Score = 102 bits (112), Expect = 1e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 10453 TAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTG 10512 ||||||| | |||| |||||| || || || ||||||||||| ||||||||||||| Sbjct 81546 TAGCTCCTCGTTCTGGTTTAGCATGGAAGAACTTCATTGATATTGGTGCTGGAGTAATTG 81605 Query 10513 ACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTA 10572 | ||||||||||||||||| || ||| | || |||||| | || |||||| Sbjct 81606 ATAGTGATTATAGAGGAAATGTTGGTGTAGTTACCTTCAATCATGCAGATACTGATTTTC 81665 Query 10573 TAATAAATAGAGGAGATAGAATATCTCAATTAAT 10606 | |||| ||||| || |||||| | || ||||| Sbjct 81666 AAGTAAAGAGAGGTGACAGAATAGCGCAGTTAAT 81699 Score = 89.7 bits (98), Expect = 8e-13 Identities = 150/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 10394 TAAAAAATTAATAAAAACTGATTTAATTATAGAAATTCCTAAAGGATGTTATGCAAGATT 10453 |||||| | | ||||||| | || ||| | |||||||| ||| |||| ||| | Sbjct 82372 TAAAAATATTGTTAAAACTGGTGTATTTACAAGTATTCCTAATGGAACATATGGTAGAAT 82431 Query 10454 AGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGA 10513 | || || | || | |||||| || ||||| ||||| ||||||||| || ||||| Sbjct 82432 ATCTTGCACACCTAAATTAGCT---AAGCAATTTGTTGATGGTGGAGCTGGTGTTATTGA 82488 Query 10514 CGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCT---AATGAAGATTT 10570 |||||||||||| | | || || || | |||||||||||| |||||| | Sbjct 82489 TTCAGATTATAGAGGTGAAATTGGTGTTATTCTTTTTAATCATTCTCCAAATGAA---AT 82545 Query 10571 TATAATAAATAGAGGAG-ATAGAATATCTCAATT 10603 | |||||||| ||| || || ||||| ||||| Sbjct 82546 TGTAATAAATGGAGAAGTATGTAATATGACAATT 82579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743512942172160