Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1382 221 1e-52 seq182 93.3 3e-14 >seq1382 Length=24816 Score = 221 bits (244), Expect = 1e-52 Identities = 413/602 (69%), Gaps = 6/602 (1%) Strand=Plus/Plus Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 ||| || |||||||| || ||| | |||||||||| ||| |||| ||| || |||||||| Sbjct 14748 ATTGCCATTATTAACAACAAAAAGAGTATTTTGGAGAGGAGTTGCTGAGGAATTATTATG 14807 Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGG-A 20161 ||||||||| || |||||| | | | || | |||||| || | |||||| | Sbjct 14808 GTTTATTAATGGTGATACAAATGCCAATCATCTCGCAGAAAAGAACATTCATATTTGGGA 14867 Query 20162 GCGCACATGGATCTAAGCAATTTTTACACAGCAAT--GGATTTGACAACCGTCAAGAGGG 20219 ||| |||| || | |||| | | | ||| || || | | | ||| ||| Sbjct 14868 TGGCA-ATGGTTCAAGAGAATTCCTTGATA--AATTAGGTTTAAAGGATAGAGAAGTGGG 14924 Query 20220 GGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACAT 20279 ||||| ||||| || ||||||||||||||| | |||||||| ||||||||| ||| | Sbjct 14925 TGATTTAGGTCCAGTTTATGGATTTCAATGGCGTCATTTTGGTGCTGAATATAAAGACTT 14984 Query 20280 GAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAA 20339 || || ||||| | ||||||| || ||||| | | || || | |||||| Sbjct 14985 CAATACTGATTATACTAATAAAGGAGTTGACCAATTGAAGGAAGTAATAGAAACAATTAA 15044 Query 20340 AACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTT 20399 || || |||| || | |||||||| || || ||||| ||| | | | ||| Sbjct 15045 AAACAATCCAACGGATCGTAGAATTATATTGACAGCTTGGAATCCTAGTGCTATTCCTAA 15104 Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 |||||| || ||||| ||||||||| | || || ||||| || |||| ||| || || Sbjct 15105 AATGGCATTACCTCCTTGTCATATGATGTGTCAGTTTTATGTAAGTAATGGTGAGTTATC 15164 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||||||||||||| |||| ||||||||| | || ||||| || ||||| ||| Sbjct 15165 ATGTCAAATGTATCAAAGATCATGCGATATGGGATTAGGCGTTCCATTTAATATAGCATC 15224 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGT 20579 ||| | | | || | | || || |||||||| | |||||| | ||||| || || Sbjct 15225 TTACTCATTATTGACTATTTTAATCGCTCATGTTACTGGGTTAAAACCAGGTGAGTTTGT 15284 Query 20580 CCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTT 20639 || | || || | ||| |||| ||| || || ||||| || ||| ||| || Sbjct 15285 ACATGTTACTGGTGATACTCATGTTTATAATAACCACATTGAACCATTGAAAGAACAATT 15344 Query 20640 AA 20641 || Sbjct 15345 AA 15346 >seq182 Length=52265 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 20416 TGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAA 20475 ||||||||| | || || ||||| || |||| ||| || || ||||||||||||||| Sbjct 2 TGTCATATGATGTGTCAGTTTTATGTAAGTAATGGTGAGTTATCATGTCAAATGTATCAA 61 Query 20476 CGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACG 20535 |||| ||||||||| | || ||||| || ||||| ||| ||| | | | || Sbjct 62 AGATCATGCGATATGGGATTAGGCGTTCCATTTAATATAGCATCTTACTCATTATTGACT 121 Query 20536 TATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGAC 20595 | | || || |||||||| | |||||| | ||||| || || || | || || Sbjct 122 ATTTTAATCGCTCATGTTACTGGGTTAAAACCAGGTGAGTTTGTACATGTTACTGGTGAT 181 Query 20596 GCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAA 20641 | ||| |||| ||| || || ||||| || ||| ||| |||| Sbjct 182 ACTCATGTTTATAATAACCACATTGAACCATTGAAAGAACAATTAA 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399176955400360