Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq1382 118 1e-21 >seq1382 Length=24816 Score = 118 bits (130), Expect = 1e-21 Identities = 236/349 (68%), Gaps = 23/349 (7%) Strand=Plus/Plus Query 104403 TGATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATATTGGGTG 104462 ||||||||| || ||||||| ||||| ||| | |||| ||||| | |||| | | Sbjct 14925 TGATTTAGGTCCAGTTTATGGATTTCAATGGCGTCATTTTGGTGCTGAATATAAAGACTT 14984 Query 104463 CGATAATAAATATGGTGGTATAG------ATCAACTCAAAAATATTATTACAACAATTCA 104516 | ||| | | ||| | || || | ||| | || | | || ||||||| | Sbjct 14985 CAATACTGATTATACTAATAAAGGAGTTGACCAATTGAAGGAAGTAATAGAAACAATTAA 15044 Query 104517 AAATGAACCTTGGGATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTAA 104576 ||| | || |||| | ||||| ||||| ||||||||| || | | || | |||| Sbjct 15045 AAACAATCCAACGGATCGTAGAATTATATTGACAGCTTGGAATCCTAGTGCTATTCCTAA 15104 Query 104577 AATGGCACTTCCTCCTTGTCATTGTATAGCACATTTTGATGTAAGTTCAAAAATAAATGG 104636 ||||||| | |||||||||||| || || ||| |||||||| ||||| Sbjct 15105 AATGGCATTACCTCCTTGTCATATGATGTGTCAGTTTTATGTAAGT---------AATGG 15155 Query 104637 TAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATC-TGCAGATATGGGGTTGGGAGTTC 104695 | || || || ||||| | | ||||||||| ||| |||||||| || || |||| Sbjct 15156 T------GAGTTATCATGTCAAATGTATCAAAGATCATGC-GATATGGGATTAGGCGTTC 15208 Query 104696 CTTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCATGT 104744 | ||||| |||||| ||| ||||||| || | |||| |||||||| Sbjct 15209 CATTTAATATAGCATCTTACTCATTATTGACTATTTTAATCGCTCATGT 15257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679802095359360