Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq181 107 2e-18 >seq181 Length=610132 Score = 107 bits (118), Expect = 2e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 24821 AAGTTAACATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATG 24880 || |||| ||||||| || |||||||||||| | || |||||||| || ||| | |||| Sbjct 522295 AACTTAAACTCATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATG 522354 Query 24881 TCGAATCGAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTAC 24940 | ||| | || || | | | || | || |||| |||||| | |||||||| | | Sbjct 522355 TTGAACCAAGTGATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTC 522414 Query 24941 CGGTTGACCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGA 25000 | || || ||| | || || | || || || ||| | |||||| | ||| | | Sbjct 522415 CTCCAGATCAACAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCA 522474 Query 25001 ACGATTACAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 ||||||| ||| |||||||| | || | |||||||||||| ||||| | || ||| Sbjct 522475 GTGATTACAACATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGGT 522533 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || |||||||||||| | || |||||||| || ||| | ||||| ||| | || Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | | || | || |||| |||||| | |||||||| | || || || Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||| | || || | || || || ||| | |||||| | ||| | | ||||||| | Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || |||||||| | || | |||||||||||| ||||| | || || Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418296617980160