Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1382 197 3e-45 >seq1382 Length=24816 Score = 197 bits (218), Expect = 3e-45 Identities = 409/606 (67%), Gaps = 2/606 (0%) Strand=Plus/Plus Query 35195 ATGAGGTTCTCTCTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGG 35254 ||||| || || | ||||| |||| | ||| | | || || || | | | || ||| Sbjct 14722 ATGAGATTTTCATTGAGAGACAACACATTGCCATTATTAACAACAAAAAGAGTATTTTGG 14781 Query 35255 AGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTG 35314 |||||||||| || ||| | | ||||| || | || ||||| | ||||| | | Sbjct 14782 AGAGGAGTTGCTGAGGAATTATTATGGTTTATTAATGGTGATACAAATGCCAATCATCTC 14841 Query 35315 GCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGA 35374 || | ||||| || || || ||| | | ||||| || | ||||| | || | | Sbjct 14842 GCAGAAAAGAACATTCATATTTGGGATGGCAATGGTTCAAGAGAATTCCTTGATAAATTA 14901 Query 35375 GGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCAT 35434 || ||| | ||||||| || ||| ||||| || || || || ||||| |||||||||||| Sbjct 14902 GGTTTAAAGGATAGAGAAGTGGGTGATTTAGGTCCAGTTTATGGATTTCAATGGCGTCAT 14961 Query 35435 TTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTG 35494 ||||||||||||||| | || | | ||||||||| || || |||| |||||| Sbjct 14962 TTTGGTGCTGAATATAAAGACTTCAATACTGATTATACTAATAAAGGAGTTGACCAATTG 15021 Query 35495 GCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCA 35554 | || || | || | | | | |||||| ||| | || || || |||| || Sbjct 15022 AAGGAAGTAATAGAAACAATTAAAAACAATCCAACGGATCGTAGAATTATATTGACAGCT 15081 Query 35555 TGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTT 35614 |||||||||| | | ||| ||||| | ||||| || || |||| ||| ||| Sbjct 15082 TGGAATCCTAGTGCTATTCCTAAAATGGCATTACCTCCTTGTCATATGATGTGTCAGTTT 15141 Query 35615 TATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTG 35674 ||||| |||||| || || || || || ||||||| || | ||| | || || Sbjct 15142 TATGTAAGTAATGGTGAGTTATCATGTCAAATGTATCAAAGATCATGCGATATGGGATTA 15201 Query 35675 GGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGC-CAGTATGGT 35733 ||||| || || ||||| ||||| ||||| | ||||| | | || || || | | Sbjct 15202 GGCGTTCCATTTAATATAGCATCTTACTCATTATTGACTATTTTAATCGCTCATGTTACT 15261 Query 35734 GGGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCA 35793 |||| ||||||| || |||||| | | | |||||| | || ||||||||| ||| Sbjct 15262 GGGT-TAAAACCAGGTGAGTTTGTACATGTTACTGGTGATACTCATGTTTATAATAACCA 15320 Query 35794 CATTGA 35799 |||||| Sbjct 15321 CATTGA 15326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989565640742840