Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1421 82.4 6e-11 >seq1421 Length=125447 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 |||||| || ||||| | ||| || ||||| | |||||||| || ||||| | | Sbjct 52312 TCTTAAGACTAAATGAAGTGTGGATTCTTTTTGGATGTTGTAATCAGATAATGTTCTGCC 52253 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 || || |||||||| || ||||||||||||| |||||||| | || | ||||||||| Sbjct 52252 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCTTT 52193 Query 43014 TTC 43016 || Sbjct 52192 ATC 52190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381362869779984