Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq181 120 3e-22 seq1421 86.0 5e-12 >seq181 Length=610132 Score = 120 bits (132), Expect = 3e-22 Identities = 177/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 19958 AATTTAAATATATTTTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGAT 20017 |||| ||| |||| ||| ||| |||| || || ||||| ||||||| |||||| Sbjct 522784 AATTAAAAATTATTCTATTCGCATCCACCTCTCAATCTTAACACTAAATGTAAAGTAGAT 522725 Query 20018 TCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAA 20077 ||||| || ||||||||||| | | |||| || |||||| ||||| || || || | Sbjct 522724 TCTTTCTGAATGTTGTAATCACTGAGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAG 522665 Query 20078 ATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGG 20137 || | || |||||||| || | |||||||| || |||||| || || | | Sbjct 522664 ATCAATCTTTGTTGATCTGGAGGAATACCTTCTTTATCTTGAATTTTGGCCTTGACGTTG 522605 Query 20138 CCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACA 20197 ||| || ||| | ||||| || | |||||| |||||||| || | ||||| ||| Sbjct 522604 TCAATAGTATCACTTGGTTCAACATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACA 522545 Query 20198 AAAATTTGCAT 20208 || |||||||| Sbjct 522544 AAGATTTGCAT 522534 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || || ||||| ||||||| ||||||||||| || ||||||||||| | Sbjct 522532 CCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACTG 522473 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||| ||||| || || || | || | || |||||||| || Sbjct 522472 AGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGA 522413 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| || || | | ||| || ||| | ||||| Sbjct 522412 ATACCTTCTTTATCTTGAATTTTGGCCTTGACGTTGTCAATAGTATCACTTGGTTCAACA 522353 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | |||||| |||||||| || | ||||| ||||| |||||||| Sbjct 522352 TCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCAT 522306 >seq1421 Length=125447 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 19981 TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCC 20040 ||| |||| ||| || || || ||||| ||||| ||||||||||| ||||||||||| Sbjct 52324 TCCACCTCTTAATCTTAAGACTAAATGAAGTGTGGATTCTTTTTGGATGTTGTAATCAGA 52265 Query 20041 CATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGG 20100 | ||| | |||||| |||||||| || ||| |||| | || |||||||| || Sbjct 52264 TAATGTTCTGCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGG 52205 Query 20101 CACGCCTTCTTTGTC 20115 | |||||||| || Sbjct 52204 AATACCTTCTTTATC 52190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419579795334888