Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1382 260 4e-64 seq182 131 4e-25 >seq1382 Length=24816 Score = 260 bits (288), Expect = 4e-64 Identities = 441/632 (70%), Gaps = 5/632 (1%) Strand=Plus/Plus Query 111307 CAACTCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAAC 111366 |||| |||| ||| | | |||||||| || || ||||| ||| ||| || ||| Sbjct 14742 CAACACATTG-CCATTATTAACAACAAAAAGAGTATTTTGGAGAGGAGTTGCTGAGGAAT 14800 Query 111367 TTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAA 111426 | | ||||||||| || ||||||||| ||| | || |||| ||| || | | | Sbjct 14801 TATTATGGTTTATTAATGGTGATACAAATGCCAATCATCTCGCAGAAAAGAACATTCATA 14860 Query 111427 TTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAG 111486 |||||||||| ||||| ||| | || || || ||| | | ||| | || | |||| Sbjct 14861 TTTGGGATGGCAATGGTTCAAGAGAATTCCTTGATAAATTAGGTTTAAAGGATAGAGAAG 14920 Query 111487 AAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAA 111546 |||||| | || |||||||| |||||||||||||| || |||||||| || || ||| Sbjct 14921 TGGGTGATTTAGGTCCAGTTTATGGATTTCAATGGCGTCATTTTGGTGCTGAATATAAAG 14980 Query 111547 CCATGCACGACTCATATGATTCACAG-GGAACTGATCAATTACAGAATGTCATTGATCAA 111605 | | || ||| || | | | | ||| ||| ||||| || | || || || | Sbjct 14981 ACTT-CAATACTGATTATACTAATAAAGGAGTTGACCAATTGAAGGAAGTAATAGAAACA 15039 Query 111606 ATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTG 111665 ||||| ||||| ||||| |||| | ||||| ||| || ||||| || | ||| | Sbjct 15040 ATTAAAAACAATCCAACGGATCGTAGAATTATATTGACAGCTTGGAATCCTAGTGCTATT 15099 Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATG 111725 ||||||||| | || || |||||| | ||||| |||||||||||| | || | Sbjct 15100 CCTAAAATGGCATTACCTCCTTGTCATATGATGTGTCAGTTTTATGTAAGTAATGGTGAG 15159 Query 111726 CTTTCATGCCAAATGTATCAGCGATC-TGCTGATATTGGTCTTGGTGTTCCGTTTAATAT 111784 | ||||| ||||||||||| |||| ||| ||||| || | || ||||| |||||||| Sbjct 15160 TTATCATGTCAAATGTATCAAAGATCATGC-GATATGGGATTAGGCGTTCCATTTAATAT 15218 Query 111785 TGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGA 111844 ||| |||| || || | ||| |||||||||||| |||| | ||||| ||||| Sbjct 15219 AGCATCTTACTCATTATTGACTATTTTAATCGCTCATGTTACTGGGTTAAAACCAGGTGA 15278 Query 111845 ATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTAAAAC 111904 || | || |||| || ||| | |||||||| | ||||||||||| || | ||| Sbjct 15279 GTTTGTACATGTTACTGGTGATACTCATGTTTATAATAACCACATTGAACCATTGAAAGA 15338 Query 111905 ACAGTTGAAGCGCAAACCATACGATTTCCCAA 111936 ||| || ||| | || || || |||||||| Sbjct 15339 ACAATTAAAGAGAAATCCTTATCCTTTCCCAA 15370 >seq182 Length=52265 Score = 131 bits (144), Expect = 4e-25 Identities = 181/251 (72%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 111687 TGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAG 111746 |||||| | ||||| |||||||||||| | || | | ||||| ||||||||||| Sbjct 2 TGTCATATGATGTGTCAGTTTTATGTAAGTAATGGTGAGTTATCATGTCAAATGTATCAA 61 Query 111747 CGATC-TGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTAC 111805 |||| ||| ||||| || | || ||||| |||||||| ||| |||| || || | || Sbjct 62 AGATCATGC-GATATGGGATTAGGCGTTCCATTTAATATAGCATCTTACTCATTATTGAC 120 Query 111806 TTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGA 111865 | |||||||||||| |||| | ||||| ||||| || | || |||| || || Sbjct 121 TATTTTAATCGCTCATGTTACTGGGTTAAAACCAGGTGAGTTTGTACATGTTACTGGTGA 180 Query 111866 TGCGCATGTTTACACAAACCACATTGATGCACTTAAAACACAGTTGAAGCGCAAACCATA 111925 | | |||||||| | ||||||||||| || | ||| ||| || ||| | || || || Sbjct 181 TACTCATGTTTATAATAACCACATTGAACCATTGAAAGAACAATTAAAGAGAAATCCTTA 240 Query 111926 CGATTTCCCAA 111936 |||||||| Sbjct 241 TCCTTTCCCAA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303329419532336