Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq181 154 1e-32 seq1421 113 4e-20 seq207 102 7e-17 >seq181 Length=610132 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||| ||| | |||||| | || || || | | Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | ||||| || ||| || |||||||| || ||||| |||||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | || || |||||| | ||||||| |||| |||| ||||| ||| Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||| ||||||||||| | ||||||||||||||||||||||| ||| Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGGA 522761 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | ||||| ||| | |||||| | || || || | | Sbjct 522306 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522365 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | ||||| || ||| || |||||||| || ||||| |||||| Sbjct 522366 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522425 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||| | || || |||||| | ||||||| |||| |||| ||||| ||| Sbjct 522426 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522485 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| ||||||||||| | ||||||||||||||||||||||| || Sbjct 522486 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGG 522532 >seq1421 Length=125447 Score = 113 bits (124), Expect = 4e-20 Identities = 108/136 (79%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || |||||||| || || || |||||||| ||| |||||| | || || ||| | ||| Sbjct 52190 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAATTAGAA 52249 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| ||||| | | | | ||||| ||||| ||||||||||| ||| |||||||||| || Sbjct 52250 GATGGCAGAA-CATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTAGTCTT 52308 Query 24203 AAGATTGAGAGGAGGA 24218 |||||| ||||| ||| Sbjct 52309 AAGATTAAGAGGTGGA 52324 >seq207 Length=264058 Score = 102 bits (112), Expect = 7e-17 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || |||||||| || || || |||||||| ||| |||||| || ||| || ||| | ||| Sbjct 251479 GATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTCGCCGGTAAACAATTAGAA 251420 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| |||| | | | | ||||| || || ||||||||||| ||| |||| ||||| || Sbjct 251419 GATGGTAGAA-CATTATCTGATTACAATATCCAAAAAGAATCAACACTTCACTTAGTATT 251361 Query 24203 AAGATTGAGAGGAGG 24217 ||||| ||||| || Sbjct 251360 GAGATTAAGAGGCGG 251346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429928412704440