Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq218 96.9 7e-15 seq73 96.9 7e-15 seq318 93.3 9e-14 >seq218 Length=113963 Score = 96.9 bits (106), Expect = 7e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 || ||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct 50576 AGTTAGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGGGGGTT 50635 Query 142559 CGAGCCCC 142566 |||||||| Sbjct 50636 CGAGCCCC 50643 >seq73 Length=215396 Score = 96.9 bits (106), Expect = 7e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 || ||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||| Sbjct 100514 AGTTAGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGGGGGTT 100573 Query 142559 CGAGCCCC 142566 |||||||| Sbjct 100574 CGAGCCCC 100581 >seq318 Length=140907 Score = 93.3 bits (102), Expect = 9e-14 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||||| Sbjct 69665 AGCCCGTCTAGCTCAGTCGGTAGAGCGCTAGGCTCTTAACCTAGTGGTCGGGGGTTCGAG 69724 Query 142563 CCCC 142566 |||| Sbjct 69725 CCCC 69728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027817731057768