Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1382 91.5 1e-13 >seq1382 Length=24816 Score = 91.5 bits (100), Expect = 1e-13 Identities = 239/362 (66%), Gaps = 2/362 (1%) Strand=Plus/Minus Query 20221 AAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCT 20280 |||||| || ||| | | |||||||||||||| | | | ||| || | || || Sbjct 15282 AAACTCACCTGGTTTTAACCCAGTAACATGAGCGATTAAAATAGTCAATAATGAGTAAGA 15223 Query 20281 GGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGA 20340 || || ||||| ||||| || || ||||| || | || || ||||||| ||||| || Sbjct 15222 TGCTATATTAAATGGAACGCCTAATCCCATATCGCATGATCTTTGATACATTTGACATGA 15163 Query 20341 AAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCA-TCA 20399 | |||||| | | ||||||||| ||||| | || ||||| || || | |||| | Sbjct 15162 TAACTCACCATTACTTACATAAAACTGACACATCATATGACAAGGAGGTAATGCCATTTT 15103 Query 20400 ACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTT 20459 | || || | || ||||| || || || ||||| | ||| ||||| |||| Sbjct 15102 AGGAATAG-CACTAGGATTCCAAGCTGTCAATATAATTCTACGATCCGTTGGATTGTTTT 15044 Query 20460 TTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCG 20519 | ||| || | | | | ||||||||||| || | ||||| |||| || Sbjct 15043 TAATTGTTTCTATTACTTCCTTCAATTGGTCAACTCCTTTATTAGTATAATCAGTATTGA 14984 Query 20520 CGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCC 20579 ||| || | || ||||| || | ||| || || || ||||| || || ||||| | Sbjct 14983 AGTCTTTATATTCAGCACCAAAATGACGCCATTGAAATCCATAAACTGGACCTAAATCAC 14924 Query 20580 CC 20581 || Sbjct 14923 CC 14922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441364811152320