Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq181 86.0 7e-12 >seq181 Length=610132 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | ||||| ||||| || || || || ||||| ||||||||| Sbjct 522533 ACCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACT 522474 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| | | || |||| |||||||||||||| || | || || || || | || Sbjct 522473 GAGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGG 522414 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158 | | || ||| | ||| |||| | |||| ||| | | | || || || | ||| Sbjct 522413 AATAC-CTTCTTTATCTTGAATTTTGGCCTTGA-CGTTGTCAATAGTATCACTTGGTTCA 522356 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| | || || |||||||| || || || || |||||||||||||| Sbjct 522355 ACATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCAT 522306 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| || | ||||| ||||| || || || || ||||| ||||||||| Sbjct 522760 CCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACTG 522701 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||| | | || |||| |||||||||||||| || | || || || || | || Sbjct 522700 AGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGA 522641 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | | || ||| | ||| |||| | |||| ||| | | | || || || | ||| | Sbjct 522640 ATAC-CTTCTTTATCTTGAATTTTGGCCTTGA-CGTTGTCAATAGTATCACTTGGTTCAA 522583 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| | || || |||||||| || || || || |||||||||||||| Sbjct 522582 CATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCAT 522534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543202967848320