Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq36 118 1e-21 >seq36 Length=62565 Score = 118 bits (130), Expect = 1e-21 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 154867 CATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGA 154926 ||||| ||||||||||| |||| ||| ||||| ||| |||| | |||| | | | Sbjct 41268 CATGTGCTATGATTACATTCCCAAGTACTTATGGTATATATGAAGATGGTATTA-AGAAA 41326 Query 154927 TA-TGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAAT 154985 || | | | | ||||| | ||||||||| ||||| | ||||| |||||| | ||| Sbjct 41327 TACTTTGAATTAATTCATCAAGCTGGTGGTCAAGTATACATGGATGGTGCAAATATGAAT 41386 Query 154986 GCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTA 155045 || || || || || | ||| | |||||| ||||| |||||| | || ||| Sbjct 41387 GCTCAAGTTGGTATAACTTGTCCAGGATTCATTGGTGCTGATGTTTGTCATTTGAATTTA 41446 Query 155046 CATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATA 155099 || ||||||||| ||||||||||||||| || ||||| || || ||| ||||| Sbjct 41447 CACAAAACATTCGCTATTCCACATGGAGGAGGTGGTCCAGGTGTTGGTGCTATA 41500 Score = 113 bits (124), Expect = 5e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 153807 GCTGCATTCTTTGCAACAACAGACA-AGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 153865 |||| ||||||||||||| ||| | | ||| ||||| || ||||| ||||||||||| Sbjct 40112 GCTGGTTTCTTTGCAACAA-AGAAAGAATATTTAAGAAAAATGCCTGGTAGAATTGTAGG 40170 Query 153866 TCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 153925 | | | |||||| | |||||||| | ||||||||| | || || | || || Sbjct 40171 TGTAACCATTGATAGTAATGGTAATAAGTGTTTAAGATTAGCAATGCAAACACGTGAACA 40230 Query 153926 GCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAA 153985 |||||| | |||||| | ||| || ||||| || || || ||||| || | | || || Sbjct 40231 GCATATAAAGAGAGATAGAGCTACTAGTAATATTTGTACTGCTCAAGCTTTATTAGCAAA 40290 Query 153986 TATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTAT 154036 |||| | ||||||||| ||||||||| || | ||| || | || || Sbjct 40291 TATGAGTTCATTCTATGCTATTTATCATGGTCCAAAAGGATTAAAAGCAAT 40341 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 || || || | ||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct 39515 GAAAACCCAAATTGGTACACTTCTTACACTCCTTATCAAGCTGAAATATCTCAAGGTCGT 39574 Query 153324 TTGGAAGCTTTATTCAATTACCAAAC 153349 || ||||| ||||| || | |||||| Sbjct 39575 TTAGAAGCATTATTAAACTTCCAAAC 39600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579202316248320