Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq36 113 5e-20 >seq36 Length=62565 Score = 113 bits (124), Expect = 5e-20 Identities = 178/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 159542 CATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGA 159601 ||||| ||||||||||| ||| ||| ||||| ||| |||| || | | | | Sbjct 41268 CATGTGCTATGATTACATTCCCAAGTACTTATGGTATATATGAAGATGGTATTA-AGAAA 41326 Query 159602 TATGTAAGATTG-TTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAAT 159660 || | ||| ||||| | ||||||||| ||||| | |||||||||||| | ||| Sbjct 41327 TACTTTGAATTAATTCATCAAGCTGGTGGTCAAGTATACATGGATGGTGCAAATATGAAT 41386 Query 159661 GCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTA 159720 || || || ||| || | ||| | | |||||| ||||| |||||| | || ||| Sbjct 41387 GCTCAAGTTGGTATAACTTGTCCAGGATTCATTGGTGCTGATGTTTGTCATTTGAATTTA 41446 Query 159721 CATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT-TGGTGT 159779 || || |||||| ||||||||||||||| || ||||| || || ||| |||| | ||| Sbjct 41447 CACAAAACATTCGCTATTCCACATGGAGGAGGTGGTCCAGGTGTTGGTGCTATATTATGT 41506 Query 159780 AGCAAAACAT 159789 || ||| ||| Sbjct 41507 AG-AAAGCAT 41515 Score = 98.7 bits (108), Expect = 1e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 158482 GCTGCATTCTTTGCAACAACAGACA-AGTATAAGAGAAAGATACCTGGCAGAATTGTAGG 158540 |||| ||||||||||||| ||| | | ||| ||||| || ||||| ||||||||||| Sbjct 40112 GCTGGTTTCTTTGCAACAA-AGAAAGAATATTTAAGAAAAATGCCTGGTAGAATTGTAGG 40170 Query 158541 TCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCA 158600 | | | ||||| | |||||||| | ||||||||| | || || | || || Sbjct 40171 TGTAACCATTGATAGTAATGGTAATAAGTGTTTAAGATTAGCAATGCAAACACGTGAACA 40230 Query 158601 GCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAA 158660 |||||| | ||||| | ||| || ||||| || || || || ||||| | | || || Sbjct 40231 GCATATAAAGAGAGATAGAGCTACTAGTAATATTTGTACTGCTCAAGCTTTATTAGCAAA 40290 Query 158661 TATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTAT 158711 |||| | |||||||| ||||||||| || | ||| || | || || Sbjct 40291 TATGAGTTCATTCTATGCTATTTATCATGGTCCAAAAGGATTAAAAGCAAT 40341 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 || || || | ||||||||| ||||||||||| ||||||||||| |||||||| || | Sbjct 39515 GAAAACCCAAATTGGTACACTTCTTACACTCCTTATCAAGCTGAAATATCTCAAGGTCGT 39574 Query 157999 TTGGAAGCTTTATTCAATTACCAAAC 158024 || ||||| ||||| || | |||||| Sbjct 39575 TTAGAAGCATTATTAAACTTCCAAAC 39600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588040556273280