Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq1161 107 2e-18 seq222 107 2e-18 >seq1161 Length=17535 Score = 107 bits (118), Expect = 2e-18 Identities = 193/279 (69%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 150958 GTGTCTGATTATACTGGTTCACCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCA 151017 || ||||| || || |||| |||||||| | || ||| | || ||||||||||||||| Sbjct 923 GTATCTGAATACACAGGTTTTCCAGAAATGATGGACGGACGTGTTAAGACTTTACATCCA 864 Query 151018 AAGATTCATGGTGGTATTCTTGCACAACGAGGTAATTCTAGTCATGATTTAGATCTTAAG 151077 || | || || ||| | | | | |||| ||| | ||||| ||||| |||| Sbjct 863 AAAGTACACGGAGGTTTATTAGGTGTAAGAGGAAATGAGAAACATGAGGAAGATCGTAAG 804 Query 151078 GTAAATCGTATTGAACCGATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACT 151137 ||| | | ||| ||||||| | || | | || ||||||||||| || | || Sbjct 803 AACAATGGAGTAGAATGGATTGATTTAGTAGTAATGAATTTATATCCATTTGAATTAGCT 744 Query 151138 GTTGCTAAACCAGGT-GTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCC 151196 ||| |||| |||| || | | ||| ||||||||||| || ||||||||||| Sbjct 743 GTTTCTAA---AGGTAGTGA-TTTTGATACTTGTATTGAGAATATCGATATTGGTGGTCC 688 Query 151197 TAGTATGGTAAGATCAGCAGCAAAGAATTATAAACATGT 151235 |||||| |||||||| | || |||||| | || |||| Sbjct 687 AAGTATGTTAAGATCATCTGCTAAGAATCACAACTATGT 649 >seq222 Length=346251 Score = 107 bits (118), Expect = 2e-18 Identities = 193/279 (69%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 150958 GTGTCTGATTATACTGGTTCACCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCA 151017 || ||||| || || |||| |||||||| | || ||| | || ||||||||||||||| Sbjct 291019 GTATCTGAATACACAGGTTTTCCAGAAATGATGGACGGACGTGTTAAGACTTTACATCCA 290960 Query 151018 AAGATTCATGGTGGTATTCTTGCACAACGAGGTAATTCTAGTCATGATTTAGATCTTAAG 151077 || | || || ||| | | | | |||| ||| | ||||| ||||| |||| Sbjct 290959 AAAGTACACGGAGGTTTATTAGGTGTAAGAGGAAATGAGAAACATGAGGAAGATCGTAAG 290900 Query 151078 GTAAATCGTATTGAACCGATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACT 151137 ||| | | ||| ||||||| | || | | || ||||||||||| || | || Sbjct 290899 AACAATGGAGTAGAATGGATTGATTTAGTAGTAATGAATTTATATCCATTTGAATTAGCT 290840 Query 151138 GTTGCTAAACCAGGT-GTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCC 151196 ||| |||| |||| || | | ||| ||||||||||| || ||||||||||| Sbjct 290839 GTTTCTAA---AGGTAGTGA-TTTTGATACTTGTATTGAGAATATCGATATTGGTGGTCC 290784 Query 151197 TAGTATGGTAAGATCAGCAGCAAAGAATTATAAACATGT 151235 |||||| |||||||| | || |||||| | || |||| Sbjct 290783 AAGTATGTTAAGATCATCTGCTAAGAATCACAACTATGT 290745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582837450451200