Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq1382 141 1e-28 seq788 95.1 2e-14 >seq1382 Length=24816 Score = 141 bits (156), Expect = 1e-28 Identities = 325/475 (68%), Gaps = 27/475 (6%) Strand=Plus/Plus Query 104985 GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAAT 105044 || ||| ||||||||||| ||| ||||||||||||||||| | ||| ||| ||| ||| Sbjct 14915 GAGAAGTGGGTGATTTAGGTCCAGTTTATGGATTTCAATGGCGTCATTTTGGTGCTGAAT 14974 Query 105045 ATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAG 105104 ||| |||| |||| || ||||| |||| | |||||||| | |||| |||| Sbjct 14975 ATAAAGACTTCAATACTGATTATACTAATAAAGGAGTTGACCAATTGAAGGAAGTAATAG 15034 Query 105105 AAACTATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAG-TTGGAAT----GT 105159 |||| || ||||| || || | ||| ||||| | ||| || || ||||||| || Sbjct 15035 AAACAATTAAAAACAATCCAACGGATCGTAGAATTA-TATTGACAGCTTGGAATCCTAGT 15093 Query 105160 GTCACAATTATCAGATATGGCTCTTCCACCGTGTCAT-TGTTTGGTACAATTTTACATTA 105218 | | ||| | | ||||| | || || |||||| || | || || ||||| | Sbjct 15094 G---CTATT-CCTAAAATGGCATTACCTCCTTGTCATATGATGTGT-CAGTTTTA---TG 15145 Query 105219 GAAATAAAATTTATTTAGATTGTCAATTGTATCAAAGATC-TGCAGATTTAGGATTAGGT 105277 || ||| | | ||| |||||| ||||||||||||| ||| ||| | |||||||| Sbjct 15146 TAAGTAATGGTGAGTTATCATGTCAAATGTATCAAAGATCATGC-GATATGGGATTAGGC 15204 Query 105278 GTACCATATAATATTGGTTTCTATTCATTTTTG--GTGTGTGTTCTCTCA---AAATGGT 105332 || |||| |||||| | | || ||||| ||| | | || |||| | ||| Sbjct 15205 GTTCCATTTAATATAGCATCTTACTCATTATTGACTATTTTAATCGCTCATGTTACTGG- 15263 Query 105333 GTAATCTAACCCCCGGAAAATTTATTCATACTTTTGGAGATGTTCATGTATATTCTAACC 105392 || ||| || || | ||| | ||| | ||| ||| |||||| ||| ||||| Sbjct 15264 GT----TAAAACCAGGTGAGTTTGTACATGTTACTGGTGATACTCATGTTTATAATAACC 15319 Query 105393 ATGTTGACCAATTAAAAATTCAATTAAACAGAAAACCTTACACCTTCCCAAAGGT 105447 | |||| | ||| ||| |||||||| ||||| ||||| | |||||||| || Sbjct 15320 ACATTGAACCATTGAAAGAACAATTAAAGAGAAATCCTTATCCTTTCCCAAAAGT 15374 >seq788 Length=386197 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 126602 AATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTATGATTTATG 126660 |||||| || ||||| | | || |||| | ||||||| ||| |||||||| |||| Sbjct 255133 AATTGGTGATAAATTCTCCAGTAGACATGGTC-AAAAAGGTACTGTTGGTATGACTTATA 255075 Query 126661 CACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTATAATTAATCCAA 126720 ||| ||||||||||||||||| | |||||| || || |||||||| |||||||| Sbjct 255074 GACAGGAAGATATGCCGTTTACTCGTCAAGGTATTACACCTGATATTATGGTTAATCCAC 255015 Query 126721 ATTGTATACCGTCAAGAATGACCATAAATCAAATAATTG 126759 || ||| || || | ||||| || |||| |||||| Sbjct 255014 ATGCTATTCCATCGCGTATGACTATTGGTCAATTAATTG 254976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658391282902080