Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq144 136 9e-27 seq1018 91.5 3e-13 seq44 84.2 5e-11 >seq144 Length=166767 Score = 136 bits (150), Expect = 9e-27 Identities = 281/413 (68%), Gaps = 10/413 (2%) Strand=Plus/Minus Query 150359 ATTCAGATTCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTT 150418 ||||| ||||||| | | | ||| ||||| ||| | || | ||||| ||||||||| Sbjct 49515 ATTCAAATTCTTTGTAGAAGAACTAAAAACAATCCAGTTCTAATCGGTGATCCAGGTGTT 49456 Query 150419 GGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGAT 150478 ||||| || ||| || || | | | || ||| | ||| | || || || ||||| Sbjct 49455 GGTAAGACTGTAATTGTAGAAGCAATTGCGCAAAGAATCATTTCAGGAGAAGTACCAGAA 49396 Query 150479 TCTATGAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAG 150538 | |||||||||| | || | || || || | ||||| || | |||||| || | Sbjct 49395 TATATGAAAGATAAAAAGATATTATCATTAGATTTAGGTGCTTTAATTGCTGGAACACAA 49336 Query 150539 TATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAA--CTAAAAGAACGC- 150595 |||||||||||||| ||| || | || | || | ||| ||||| | || ||| || Sbjct 49335 TATCGTGGTGAATTTGAAAAAAGATTAAAAAAACTACTAAAAGAAATCCAATCGAATGCA 49276 Query 150596 GATGATGTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGC 150655 | | | || | || || || ||| | || || | || |||||||||| ||| Sbjct 49275 GGTAAGACAATCTTATTTATAGACGAATTACACACATTGATTGGTGCTGGTG---CTGTG 49219 Query 150656 GGCGGTTCTTTGGAT--ATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTC 150713 || ||||| || ||| || | |||||||||||||| | || | | || ||| || Sbjct 49218 GGTGGTTCATTAGATGCATCA--AATATGTTAAAACCGGAGTTAGCAAGAGGAGAATTTA 49161 Query 150714 GTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGAT 150766 || || |||||||||||| ||||||||||||||| | || ||| |||| Sbjct 49160 GTTGTATTGGTGCAACAACCATTGATGAATATCGTAAATATATAGAAGGAGAT 49108 >seq1018 Length=186715 Score = 91.5 bits (100), Expect = 3e-13 Identities = 356/542 (66%), Gaps = 21/542 (4%) Strand=Plus/Plus Query 150293 ACTGATCTTGCAGCAGAA-GGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTTGA 150351 ||||| || || | |||| |||||||| |||||| ||||||| | || ||| || Sbjct 149691 ACTGAGCTAGCCG-AGAATGGTAAACTCGATCCAGTAATTGGAAGGGATGATGAGATTCG 149749 Query 150352 TGATCTAATTCAGATTCTTT-CTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAAC 150410 | | ||| ||| | || || | | || ||||| ||| | ||| | || |||| Sbjct 149750 TAGAGTGATT-AGAGTATTAGCTAGAAGGACTAAAAACAATCCAGTATTAATAGGAGAAC 149808 Query 150411 CAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATG 150470 ||||||| ||||||||| ||| ||||| |||||||||||| | || | | | |||| Sbjct 149809 CAGGTGTAGGTAAAACAGCAATAGTTGAAGGATTAGCACAAAGAATTGTTCAGAAGGATG 149868 Query 150471 TTCCAGATTCTATGAAAGATGTTGAAATT-CTTTCTTTGAATATGGGTGCATTTACTGCT 150529 | || | | || | |||| ||||| | || ||| |||| |||||||| ||| Sbjct 149869 TGCCTAAGACATTGCA--ATGT--AAATTAATATCGTTGGATATTGGTGCATTAGTAGCT 149924 Query 150530 GGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAACTAAAA 150589 ||| | || || ||||| ||||| |||||| | || | | | | | ||| | || Sbjct 149925 GGTGCGAAATACCGTGGGGAATTTGAAGAAAGGTTAAAAGCTGTAATTAAGGAAGTTGAA 149984 Query 150590 GAACGCGATG---ATGTTATTCTGTTCATCGATGAAATCCATACTATTA-TGGGTGCTGG 150645 || | |||| |||| || | || || |||||| | ||| | ||| | |||||||| Sbjct 149985 GAGAGTGATGGTAATGTAATATTATTTATTGATGAATTGCAT-TTGTTATTAGGTGCTGG 150043 Query 150646 TGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGG 150705 | | || | ||| | ||||| ||| ||||||| || || | | || Sbjct 150044 T---AAAGGTGAAGGTGCAATGGATGCTGCTAATCTGTTAAAGCCAATGTTAGCAAGAGG 150100 Query 150706 TGAAATTCG-TGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAG 150764 ||| | | ||| || ||||| ||||||| || ||||||| ||| | | || |||| Sbjct 150101 TGAGTTGAGATGT-ATTGGTGCTACAACCTTAGAAGAATATCAGAAATATGTAGAGAAAG 150159 Query 150765 ATGCAGCACTACAGCGTCG-TTTCATGAAGGTTGATATTGTTGAACCGACACTTGAAGAA 150823 || ||| | | | | ||||| || || |||| | |||||| ||| | ||||| Sbjct 150160 ATAAAGCCTTTGAAAGAAGATTTCAACAA-GTATATATCGGTGAACCAACAGTAGAAGAT 150218 Query 150824 AC 150825 || Sbjct 150219 AC 150220 >seq44 Length=64512 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/181 (72%), Gaps = 5/181 (3%) Strand=Plus/Plus Query 150380 ACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGAC 150439 || ||||| ||| | ||| | || |||||||| || ||||||||| ||| ||||| Sbjct 29517 ACTAAAAACAATCCAGTATTAATAGGAGAACCAGGCGTAGGTAAAACAGCAATAGTTGAA 29576 Query 150440 GGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATT 150499 |||||||||||| | || | | | ||||| ||| | | || | | |||| ||||| Sbjct 29577 GGATTAGCACAAAGAATTGTTCAGAAGGATGTGCCAAAGAC-ATTACA-ATGT--AAATT 29632 Query 150500 -CTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGA 150558 | || || |||| |||||||| |||||| |||| ||| | |||||||| ||||| Sbjct 29633 AATGTCATTAGATATTGGTGCATTAGTGGCTGGTGCTAAATATAGAGGTGAATTTGAAGA 29692 Query 150559 A 150559 | Sbjct 29693 A 29693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147569109329104