Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq36 116 4e-21 >seq36 Length=62565 Score = 116 bits (128), Expect = 4e-21 Identities = 179/250 (72%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 138173 ATGTTTTGCTACACCA-ATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGA 138231 ||| ||| ||||| | |||| ||| || || ||||| || ||||||||||||||| || Sbjct 41515 ATGCTTT-CTACATAATATAGCACCAACACCTGGACCACCTCCTCCATGTGGAATAGCGA 41457 Query 138232 ATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGAC 138291 |||| || |||||||| | |||||| ||||| |||||| | | ||| | || || Sbjct 41456 ATGTTTTGTGTAAATTCAAATGACAAACATCAGCACCAATGAATCCTGGACAAGTTATAC 41397 Query 138292 CTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGA 138351 | || || ||||| | |||||||||||| | ||||| ||||||||| | ||||| | Sbjct 41396 CAACTTGAGCATTCATATTTGCACCATCCATGTATACTTGACCACCAGCTTGATGAATTA 41337 Query 138352 TCTTACA-TATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410 | | | ||| | | | || |||| ||| ||||| ||| ||| |||||||| Sbjct 41336 ATTCAAAGTATTTCT-TAATACCATCTTCATATATACCATAAGTACTTGGGAATGTAATC 41278 Query 138411 ATAATACATG 138420 ||| ||||| Sbjct 41277 ATAGCACATG 41268 Score = 98.7 bits (108), Expect = 1e-15 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 139251 ATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGC 139310 || || | || ||| | || ||||||||| ||||||||| | ||||||||| | Sbjct 40341 ATTGCTTTTAATCCTTTTGGACCATGATAAATAGCATAGAATGAACTCATATTTGCTAAT 40282 Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 | ||||| || || || || ||||| || ||| | ||||| | |||||||| || | Sbjct 40281 AAAGCTTGAGCAGTACAAATATTACTAGTAGCTCTATCTCTCTTTATATGCTGTTCACGT 40222 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGG-ATTGCCTTCGCTGTCCACTGACTGACCTACAAT 139429 ||||| | ||||||||| || || ||| || | || || | | ||||||||| Sbjct 40221 GTTTGCATTGCTAATCT-TAAACACTTATTACCATTACTATCAATGGTTACACCTACAAT 40163 Query 139430 TCTGCCAGGTATCTTTCTCTTATACT-TGTCTGTTGTTGCAAAGAATGCAGC 139480 ||| ||||| || ||||| ||| | | ||| ||||||||||||| |||| Sbjct 40162 TCTACCAGGCATTTTTCTTAAATATTCTTTCT-TTGTTGCAAAGAAACCAGC 40112 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 139938 GTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTG 139997 |||||| | || ||||| ||||| || | || |||||||| ||||||||||| |||||| Sbjct 39600 GTTTGGAAGTTTAATAATGCTTCTAAACGACCTTGAGATATTTCAGCTTGATAAGGAGTG 39541 Query 139998 TAAGATGTGTACCAACTAGGATTCTC 140023 ||||| ||||||||| | || || || Sbjct 39540 TAAGAAGTGTACCAATTTGGGTTTTC 39515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578987920128960