Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq181 152 8e-32 seq1421 149 9e-31 seq207 145 1e-29 >seq181 Length=610132 Score = 152 bits (168), Expect = 8e-32 Identities = 180/244 (74%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| | ||||| ||||||||||| | || || ||| | Sbjct 522534 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522593 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| || ||||| |||||||||||||| || |||||||| ||| Sbjct 522594 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522653 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | || |||||||| | |||||| |||||| | ||||| || Sbjct 522654 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522713 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGTAAAATTGAAT 156062 || ||||| | || | ||||||||||||||||| ||||| || ||| |||| Sbjct 522714 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGGATGCGAATAGAAT 522773 Query 156063 AATT 156066 |||| Sbjct 522774 AATT 522777 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| | ||||| ||||||||||| | || || ||| | Sbjct 522306 ATGCAAATCTTTGTTAAAACCCTTACTGGCAAAACTATTACCCTTGATGTTGAACCAAGT 522365 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||| || ||||| |||||||||||||| || |||||||| ||| Sbjct 522366 GATACTATTGACAACGTCAAGGCCAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAA 522425 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | || |||||||| | |||||| |||||| | ||||| || Sbjct 522426 CAAAGATTGATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTCTCAGTGATTACAAC 522485 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | ||||||||||||||||| ||||| ||| Sbjct 522486 ATTCAGAAAGAATCTACTTTACATTTAGTGTTAAGATTGAGAGGTGGT 522533 >seq1421 Length=125447 Score = 149 bits (164), Expect = 9e-31 Identities = 153/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 155850 GGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAA 155909 || ||||| |||||| | || || ||| || |||| ||| ||||| || ||| Sbjct 52124 GGTAAAACAATTACACTTGATGTAGAACCATCAGATACAATTGATAACGTAAAGGCTAAG 52183 Query 155910 ATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAG 155969 || |||||||||||||| || || ||||| |||||||||||||||| ||| ||||| || Sbjct 52184 ATCCAAGATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTTGCTGGTAAACAA 52243 Query 155970 CTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTA 156029 | |||||| |||||| ||||| ||||| || || ||||| | || ||||||||| Sbjct 52244 TTAGAAGATGGCAGAACATTATCTGATTACAACATCCAAAAAGAATCCACACTTCATTTA 52303 Query 156030 GTGTTAAGATTAAGAGGCGG 156049 || |||||||||||||| || Sbjct 52304 GTCTTAAGATTAAGAGGTGG 52323 >seq207 Length=264058 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 155850 GGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAA 155909 || || || || || ||||| ||||| || |||| ||| ||||| || ||| Sbjct 251545 GGTAAGACCATCACCTTAGATGTCGAGCCATCAGATACAATTGATAACGTAAAGGCTAAG 251486 Query 155910 ATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAG 155969 || |||||||||||||| || || ||||| |||||||||||||||| |||||||| || Sbjct 251485 ATCCAAGATAAAGAAGGTATTCCACCAGATCAACAAAGATTGATTTTCGCCGGTAAACAA 251426 Query 155970 CTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTA 156029 | |||||| ||||| ||||| ||||| ||||| ||||| | || ||||| ||| Sbjct 251425 TTAGAAGATGGTAGAACATTATCTGATTACAATATCCAAAAAGAATCAACACTTCACTTA 251366 Query 156030 GTGTTAAGATTAAGAGGCGGTGT 156052 || || ||||||||||||||||| Sbjct 251365 GTATTGAGATTAAGAGGCGGTGT 251343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731858753116800