Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1421 163 6e-35 seq207 147 4e-30 seq181 145 2e-29 >seq1421 Length=125447 Score = 163 bits (180), Expect = 6e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 |||||||| | | ||| |||||||| | || | ||||| ||| || ||||||||| Sbjct 52323 CCACCTCTTAATCTTAAGACTAAATGAAGTGTGGATTCTTTTTGGATGTTGTAATCAGAT 52264 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 ||||||| |||| || ||||||||||||||||| || ||||| |||||||| ||||| Sbjct 52263 AATGTTCTGCCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 52204 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || |||||||||||||| || ||| ||||| ||| || | |||||| | |||||| Sbjct 52203 ATACCTTCTTTATCTTGGATCTTAGCCTTTACGTTATCAATTGTATCTGATGGTTCTACA 52144 Query 192490 TCTAGAGTAATGGTTTTACC 192509 || || ||||| |||||||| Sbjct 52143 TCAAGTGTAATTGTTTTACC 52124 >seq207 Length=264058 Score = 147 bits (162), Expect = 4e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 192296 TTAGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGA 192355 || ||| ||||| ||| ||||| | | |||||||| || | || | ||||| || Sbjct 251332 TTGGTTCAATAACACCGCCTCTTAATCTCAATACTAAGTGAAGTGTTGATTCTTTTTGGA 251391 Query 192356 TATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCT 192415 |||| |||||||||||||||| |||| || ||||||||||| || || || ||||| | Sbjct 251392 TATTGTAATCAGATAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTT 251451 Query 192416 GTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAAT 192475 ||||||| ||||| || |||||||||||||| || ||| ||||| ||| || | || Sbjct 251452 GTTGATCTGGTGGAATACCTTCTTTATCTTGGATCTTAGCCTTTACGTTATCAATTGTAT 251511 Query 192476 CTGACGATTCTACTTCTAGAGTAATGGTTTTACC 192509 |||| | || || |||| || ||||| ||||| Sbjct 251512 CTGATGGCTCGACATCTAAGGTGATGGTCTTACC 251545 >seq181 Length=610132 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | ||| |||||||||||||||| ||||| || || |||||| Sbjct 522535 ATACCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCA 522476 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | |||| |||| || ||||| |||||||| ||||| ||||| |||||||| || Sbjct 522475 CTGAGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGA 522416 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| || || || |||| ||| | ||| Sbjct 522415 GGAATACCTTCTTTATCTTGAATTTTGGCCTTGACGTTGTCAATAGTATCACTTGGTTCA 522356 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| ||||| ||||| | ||||||| ||| || ||||| Sbjct 522355 ACATCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCAT 522306 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 |||||||| | | ||| |||||||||||||||| ||||| || || |||||| Sbjct 522760 CCACCTCTCAATCTTAACACTAAATGTAAAGTAGATTCTTTCTGAATGTTGTAATCACTG 522701 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | |||| |||| || ||||| |||||||| ||||| ||||| |||||||| || || Sbjct 522700 AGAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATCAATCTTTGTTGATCTGGAGGA 522641 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || |||||||||||||| ||||| || || || |||| ||| | ||| || Sbjct 522640 ATACCTTCTTTATCTTGAATTTTGGCCTTGACGTTGTCAATAGTATCACTTGGTTCAACA 522581 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| ||||| | ||||||| ||| || ||||| Sbjct 522580 TCAAGGGTAATAGTTTTGCCAGTAAGGGTTTTAACAAAGATTTGCAT 522534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984461735434800